Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B05_e322_03.seq
         (1528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   2.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   6.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   6.0  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 289 FTSSVILTSSIFKTTTS 239
           F S +I++ SIF TTTS
Sbjct: 232 FYSKIIISGSIFMTTTS 248


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 783 CAPTILYRILS*LHSYPPFLLI*SVEVFSKLHTSETINYSNLRTRFL 643
           C+P     +LS +H Y P +LI        L  + T  ++   T+F+
Sbjct: 130 CSPPQGQLVLSSMHKYQPRILIVKASTAQALGWAPTNVFTFPETQFI 176


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -1

Query: 787 CLCSDDIISYIVLTALLSTIPVDMISGSFFEAAYFRNNKLFES 659
           C   D+ +SYI+LT+ L+      I    FE+ Y       E+
Sbjct: 278 CFLLDEKLSYIILTSFLNNF--YFIIFQVFESFYLHKATTLET 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,129
Number of Sequences: 336
Number of extensions: 5889
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45886400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)