Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B05_e322_03.seq
         (1528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid...   237   6e-62
AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid...   237   6e-62
AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid...   237   6e-62
BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid...   236   1e-61
AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens ...   236   1e-61
AL137073-5|CAI13887.1|  140|Homo sapiens N-acetylneuraminic acid...    51   1e-05

>BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  237 bits (581), Expect = 6e-62
 Identities = 107/204 (52%), Positives = 145/204 (71%)
 Frame = +3

Query: 261 LEVKITEDVKVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 440
           LE+++     VGG +PCFIIAE+GQNHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 441 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 620
            +K LER Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 621 VNLKVPFIKIGSGDSNNLLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQFCLL 800
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 801 HXISAYPVPFEDCNLTVLQDYKIL 872
              SAYP+  ED NL V+ +Y+ L
Sbjct: 183 QCTSAYPLQPEDVNLRVISEYQKL 206


>AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  237 bits (581), Expect = 6e-62
 Identities = 107/204 (52%), Positives = 145/204 (71%)
 Frame = +3

Query: 261 LEVKITEDVKVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 440
           LE+++     VGG +PCFIIAE+GQNHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 441 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 620
            +K LER Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 621 VNLKVPFIKIGSGDSNNLLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQFCLL 800
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 801 HXISAYPVPFEDCNLTVLQDYKIL 872
              SAYP+  ED NL V+ +Y+ L
Sbjct: 183 QCTSAYPLQPEDVNLRVISEYQKL 206


>AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid
           phosphate synthase protein.
          Length = 359

 Score =  237 bits (581), Expect = 6e-62
 Identities = 107/204 (52%), Positives = 145/204 (71%)
 Frame = +3

Query: 261 LEVKITEDVKVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 440
           LE+++     VGG +PCFIIAE+GQNHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 441 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 620
            +K LER Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 621 VNLKVPFIKIGSGDSNNLLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQFCLL 800
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 801 HXISAYPVPFEDCNLTVLQDYKIL 872
              SAYP+  ED NL V+ +Y+ L
Sbjct: 183 QCTSAYPLQPEDVNLRVISEYQKL 206


>BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  236 bits (578), Expect = 1e-61
 Identities = 106/204 (51%), Positives = 145/204 (71%)
 Frame = +3

Query: 261 LEVKITEDVKVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 440
           LE+++     VGG +PCFIIAE+GQNHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 441 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 620
            +K L+R Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 621 VNLKVPFIKIGSGDSNNLLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQFCLL 800
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 801 HXISAYPVPFEDCNLTVLQDYKIL 872
              SAYP+  ED NL V+ +Y+ L
Sbjct: 183 QCTSAYPLQPEDVNLRVISEYQKL 206


>AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10797 fis, clone NT2RP4000657, weakly similar to
           SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE. ).
          Length = 359

 Score =  236 bits (578), Expect = 1e-61
 Identities = 106/204 (51%), Positives = 145/204 (71%)
 Frame = +3

Query: 261 LEVKITEDVKVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKF 440
           LE+++     VGG +PCFIIAE+GQNHQGD+ +AK++I+ AK+ GA C KFQK+ L+ KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 441 TKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFL 620
            +K L+R Y + +SWGKTYG+HK+HLEFS  QYREL +YA E+GI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 621 VNLKVPFIKIGSGDSNNLLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQFCLL 800
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 801 HXISAYPVPFEDCNLTVLQDYKIL 872
              SAYP+  ED NL V+ +Y+ L
Sbjct: 183 QCTSAYPLQPEDVNLRVISEYQKL 206


>AL137073-5|CAI13887.1|  140|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 140

 Score = 51.2 bits (117), Expect = 1e-05
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = +3

Query: 708 PLIISTGMVDKSAVKTIYDIISSEHKQFCLLHXISAYPVPFEDCNLTVLQDYKIL 872
           P++IS+GM     +K +Y I+   +  FC L   SAYP+  ED NL V+ +Y+ L
Sbjct: 11  PMVISSGMQSMDTMKQVYQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKL 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,576,907
Number of Sequences: 237096
Number of extensions: 3507689
Number of successful extensions: 9052
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9052
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22745790610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)