Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B05_e322_03.seq
         (1528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synth...   190   3e-48
AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA...   190   3e-48

>AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synthase
           protein.
          Length = 372

 Score =  190 bits (464), Expect = 3e-48
 Identities = 92/182 (50%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
 Frame = +3

Query: 312 FIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKFTKKYLERSYDNHNSWGK 491
           +IIAE+GQNHQG +  AK++I  AK AG  CVKFQK+ L  KFT+  L+R Y + ++WGK
Sbjct: 16  YIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQKSDLPAKFTRSALDREYISDHAWGK 75

Query: 492 TYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFLVNLKVPFIKIGSGDSNN 671
           TYG+HK++LEFS+ QY +L  +  E+ + FTASAMD  S +FL  L VPFIKIGSGD+NN
Sbjct: 76  TYGEHKEYLEFSKDQYLQLQAHCKELNVDFTASAMDERSLEFLSALNVPFIKIGSGDANN 135

Query: 672 LLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQ-FCLLHXISAYPVPFEDCNLT 848
              LK AA+  LPL+ISTGM     V+ I   +    K+ + L+H +S+YP   +DC+L 
Sbjct: 136 FPLLKKAANLNLPLVISTGMQTMQTVERIVQTMRESGKEDYALMHCVSSYPTDPKDCSLQ 195

Query: 849 VL 854
           ++
Sbjct: 196 LI 197


>AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA
           protein.
          Length = 372

 Score =  190 bits (464), Expect = 3e-48
 Identities = 92/182 (50%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
 Frame = +3

Query: 312 FIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKFTKKYLERSYDNHNSWGK 491
           +IIAE+GQNHQG +  AK++I  AK AG  CVKFQK+ L  KFT+  L+R Y + ++WGK
Sbjct: 16  YIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQKSDLPAKFTRSALDREYISDHAWGK 75

Query: 492 TYGDHKKHLEFSESQYRELFKYAHEIGILFTASAMDMVSFDFLVNLKVPFIKIGSGDSNN 671
           TYG+HK++LEFS+ QY +L  +  E+ + FTASAMD  S +FL  L VPFIKIGSGD+NN
Sbjct: 76  TYGEHKEYLEFSKDQYLQLQAHCKELNVDFTASAMDERSLEFLSALNVPFIKIGSGDANN 135

Query: 672 LLFLKYAASKKLPLIISTGMVDKSAVKTIYDIISSEHKQ-FCLLHXISAYPVPFEDCNLT 848
              LK AA+  LPL+ISTGM     V+ I   +    K+ + L+H +S+YP   +DC+L 
Sbjct: 136 FPLLKKAANLNLPLVISTGMQTMQTVERIVQTMRESGKEDYALMHCVSSYPTDPKDCSLQ 195

Query: 849 VL 854
           ++
Sbjct: 196 LI 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,691,379
Number of Sequences: 53049
Number of extensions: 1036972
Number of successful extensions: 2219
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2217
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8534423520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)