Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B03_e306_03.seq
         (1631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YA58 Cluster: Putative uncharacterized protein; n=1; ...    36   4.0  
UniRef50_Q34097 Cluster: Ctyochrome c oxidase subunit I; n=1; Cr...    35   5.3  
UniRef50_A5HXZ8 Cluster: Putative uncharacterized protein; n=4; ...    35   7.1  
UniRef50_Q7RC30 Cluster: Putative uncharacterized protein PY0595...    34   9.3  

>UniRef50_Q4YA58 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 85

 Score = 35.5 bits (78), Expect = 4.0
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 213 CLLLVFQTIINFIYS*LFLFNVMLYSCLFIFYLTHFLILFMYIY 82
           C   +F    NF Y  LF+    +Y  +FIFY T    L++Y+Y
Sbjct: 4   CNFFLFNIFFNFNYI-LFILIYFIYLYIFIFYKTQHAFLWLYVY 46


>UniRef50_Q34097 Cluster: Ctyochrome c oxidase subunit I; n=1;
           Crithidia fasciculata|Rep: Ctyochrome c oxidase subunit
           I - Crithidia fasciculata
          Length = 49

 Score = 35.1 bits (77), Expect = 5.3
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -3

Query: 165 LFLFNVMLYSCLFIFYLTHFLILFMYI 85
           L +F++ML  C F F+LT F+ +F+YI
Sbjct: 21  LLIFDLMLLLCFFYFFLTIFVFIFLYI 47


>UniRef50_A5HXZ8 Cluster: Putative uncharacterized protein; n=4;
           Clostridium botulinum|Rep: Putative uncharacterized
           protein - Clostridium botulinum A str. ATCC 3502
          Length = 1350

 Score = 34.7 bits (76), Expect = 7.1
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
 Frame = -1

Query: 584 SLIK**VLGNVIPPYYYHPLSSDDLNDFFLNLASAVD-----RKSFNSFTVTLWARAEGV 420
           S+I+  +LG +   YY   +  D +N+F LNL S+ +     R++ N +++ +    + +
Sbjct: 530 SIIEEPILGKMFELYYSSEIFRDSINNFMLNLNSSKEKLIKIRENINQYSIEI----KEI 585

Query: 419 RRKLIIIKINEVCFLKTVAKLKREVIFK 336
           + K + IK  E  + K   K K   IFK
Sbjct: 586 KDKDMFIKDYEKVYSKIKGKKKISKIFK 613


>UniRef50_Q7RC30 Cluster: Putative uncharacterized protein PY05954;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05954 - Plasmodium yoelii yoelii
          Length = 670

 Score = 34.3 bits (75), Expect = 9.3
 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
 Frame = -3

Query: 216 ICLLLVFQT-IINFIYS*LFL-FNVMLYSCLFI--FYLTHFLILFMYIY 82
           ICL L+  T I NF    +F+  N++ Y CLFI  F+++ F+ +F+Y+Y
Sbjct: 277 ICLQLICVTWIYNFDSIKIFIKINLLEYICLFILFFFISLFIPIFIYLY 325


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,012,293,831
Number of Sequences: 1657284
Number of extensions: 16511994
Number of successful extensions: 31225
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31129
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 177039689525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)