Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B03_e306_03.seq
         (1631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.024
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   4.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.1 bits (67), Expect = 0.024
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 213 CLLLVFQTIINFIYS*-LFLFNVMLYSCLFIFYLTHFLILFMYI 85
           C+L++   I  F Y+  LF  +++L  C++ FY  H L    +I
Sbjct: 230 CVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273



 Score = 28.3 bits (60), Expect = 0.17
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 213 CLLLVFQTIINFIYS*LFLFNVMLYSCLFIFYLTHFLILFMYIY 82
           C+ + F   + F+    +    +L+ C FI +  HFL+   Y Y
Sbjct: 61  CVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFY 104



 Score = 27.5 bits (58), Expect = 0.30
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 216 ICLLLVFQTIINFIYS*LFLFNVMLYSCLFIFYLTHFLILFMYIY 82
           +C+   +   I F    LFL  +  + C FI +  H L    +I+
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188



 Score = 27.1 bits (57), Expect = 0.40
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -3

Query: 207 LLVFQTIINFIYS*LFLFNVMLYSCLFIFYLTHFLILFMYIYTSC 73
           LL    I  F+    FL  +  + C FI +  H L L    +  C
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFC 171



 Score = 26.6 bits (56), Expect = 0.52
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 162 FLFNVMLYSCLFIFYLTHFLILFMYIYTSCRI 67
           F +  +L+ C FI +  H L L    Y  C +
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFLLCIYYFYCAL 292



 Score = 26.2 bits (55), Expect = 0.69
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -3

Query: 204 LVFQTIINFIYS*LFLFNV-MLYSCLFIFYLTHFLILFMYIYTSCRIXCSP 55
           L+F   I   +    +F + +L+ C FIF+  H L L    Y +  +   P
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLP 210



 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 165 LFLFNVMLYSCLFIFYLTHFLILFMYIYTSCR 70
           +F  +++   C++ FY    LI+ + IY  CR
Sbjct: 274 IFTMHLLFLLCIYYFYCA--LIILLCIYYFCR 303



 Score = 22.6 bits (46), Expect = 8.5
 Identities = 10/47 (21%), Positives = 18/47 (38%)
 Frame = -3

Query: 213 CLLLVFQTIINFIYS*LFLFNVMLYSCLFIFYLTHFLILFMYIYTSC 73
           C+   +   I F    LF   +++  C++ FY    L     +   C
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVC 257


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 132 LFIFYLTHFLILFMYIYT 79
           +F+ Y+  FL+L  YIY+
Sbjct: 1   MFLAYIACFLLLLYYIYS 18


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,464
Number of Sequences: 336
Number of extensions: 4729
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 49471275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)