BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030723E4_B02_e298_04.seq (1455 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 2.2 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 2.2 AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 25 2.2 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 24.6 bits (51), Expect = 2.2 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 141 WHPDNYHGDEKKLAEKKFIDIAAAKEVLT 227 +HP E+ L K+F AA+KE L+ Sbjct: 392 YHPSTQEDSEEHLTPKRFHSRAASKEDLS 420 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 24.6 bits (51), Expect = 2.2 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +3 Query: 141 WHPDNYHGDEKKLAEKKFIDIAAAKEVLT 227 +HP E+ L K+F AA+KE L+ Sbjct: 392 YHPSTQEDSEEHLTPKRFHSRAASKEDLS 420 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 24.6 bits (51), Expect = 2.2 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +3 Query: 387 LTLNITSDHSEVTAIQKPPG 446 +TLNI S +++T I PPG Sbjct: 114 ITLNIESTSNKMTVILTPPG 133 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 236,691 Number of Sequences: 438 Number of extensions: 4279 Number of successful extensions: 11 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 50601375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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