Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_A12_e377_02.seq
         (1488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   2.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   7.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 363 LNYSLVFVLLKVILCVQHFKKYNFNAQFKALIKHQFFFFNIE 488
           +NY+LVF +LK  +  Q  K +  + +    +   F   N++
Sbjct: 351 INYTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLK 392


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 1433 AGXXPKXGGPXPGPXXPXPP 1374
            AG   +  GP P P  P PP
Sbjct: 196  AGYGLRNYGPEPVPSTPYPP 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,810
Number of Sequences: 336
Number of extensions: 5790
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44554875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)