Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A12_e377_02.seq
(1488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.91
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.91
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.91
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.6
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 31 1.6
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 31 2.1
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 31 2.1
AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine re... 31 2.1
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 31 2.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 2.8
Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical pr... 30 3.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 3.7
U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 30 4.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.8
AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 30 4.8
AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical ... 30 4.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.8
Z92782-6|CAB07191.1| 319|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 29 6.4
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 29 6.4
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 29 6.4
U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm recep... 29 8.5
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 8.5
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 8.5
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.91
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXP--KXGGPXPGPXXPXPP 1374
PP G P P P AG P + G P P P PP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXP----GPXXPXPPR 1371
PPR G P P P P G P P P P PPR
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.91
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXP--KXGGPXPGPXXPXPP 1374
PP G P P P AG P + G P P P PP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXP----GPXXPXPPR 1371
PPR G P P P P G P P P P PPR
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.91
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXP--KXGGPXPGPXXPXPP 1374
PP G P P P AG P + G P P P PP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXP----GPXXPXPPR 1371
PPR G P P P P G P P P P PPR
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -3
Query: 1474 PPXGGXPPPXPXPXPGXPQXXGAXXXGLXFXXPPGFLRXPRXXXNPXQXP--LPPG 1313
PP PP P P P PQ G PPG +R P P P PPG
Sbjct: 707 PPQPQQPPQGP-PGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPG 761
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 1472 PRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPPRFF 1365
PRGG P P P AG G P P P P PR F
Sbjct: 212 PRGGGPAPG-APRAGGSGAGGAPRPPP--PAGPRAF 244
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 1375 GGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476
GG G GPG G P G P G G G G P GG
Sbjct: 41 GGAGLGGPGIGGPGLG-GPGIG-GPGLGGPGVGG 72
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +1
Query: 1375 GGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476
GG G GPG G P G P G G G G P GG
Sbjct: 41 GGAGLGGPGIGGPGLG-GPGIG-GPGLGGPGVGG 72
>AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine
receptor, class h protein83 protein.
Length = 352
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 587 YYIGELNYVRTRIKLVVWKIL*CENTYLY*MXVFYIKKKKLVLYQCFKL---RIKIIFFK 417
+ +G LN++R K+ VW + N L+ M + + +L+ F++ R KII++
Sbjct: 87 FSVGLLNFLRVPPKIQVWLVFQSLNWMLFSMTMLLENRHNSILFNRFQITKNRTKIIYYL 146
Query: 416 V 414
V
Sbjct: 147 V 147
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 1198 SXPFXTXFCFXXPKGMGFXPXGXPGGIGPXGXAXP 1094
+ P + FCF P G P G PGG GP G P
Sbjct: 151 AAPTASDFCFDCPPG----PAGPPGGPGPPGPPGP 181
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 1475 PPRGGXPXPXPXP-XAGXXPKXGGPXPGPXXP 1383
PPRGG P P G P+ G P PGP P
Sbjct: 1575 PPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPP 1606
>Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical
protein Y37A1A.2 protein.
Length = 477
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 363 LNYSLVFVLLKVILCVQHFKKYNFNAQFKALIKH--QFFFFNIENVHLIQIGIFTS*YLP 536
L ++ +F +L V HF + F+ F +H Q +F++ + ++ + +FT +LP
Sbjct: 150 LGHTSLFFGGVTMLFVFHFVPHTFDGHFLNFDEHVVQVIYFSLMTLTVVSVVLFT--FLP 207
Query: 537 HNQFNS 554
QF+S
Sbjct: 208 TKQFDS 213
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKX------GGPXPGPXXPXP 1377
P GG P P P P P GGP PGP P P
Sbjct: 1437 PSTGGDPSPGPSPNGPSNPSVPESSTGGGPSPGP-APDP 1474
>U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of
potassium channelsprotein 16 protein.
Length = 555
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 655 KFYRHDSIRLFSLELYCLVYYFYTISVSLI-MLGPELNWLCGRYYD 521
K Y+ SI++ SL L C+ + + L+ +L EL++ G Y++
Sbjct: 187 KIYKESSIQVTSLALLCVFLIYVAVGALLLPLLNGELDFFNGLYFN 232
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXP 1383
PP G P P P P G P GGP P P P
Sbjct: 736 PPITGGPPPPPPP-GGLPPISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 1474 PPXGGXPPPXPXPXPG 1427
PP GG PPP P P PG
Sbjct: 763 PPPGGCPPPPPPPPPG 778
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPP 1374
PP G P P P P G P P PG PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXP 1383
PP G P P P P G P GGP P P P
Sbjct: 736 PPITGGPPPPPPP-GGLPPISGGPPPPPPPP 765
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 1474 PPXGGXPPPXPXPXPG 1427
PP GG PPP P P PG
Sbjct: 763 PPPGGCPPPPPPPPPG 778
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPP 1374
PP G P P P P G P P PG PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium
channel subunit n2P16 protein.
Length = 555
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 655 KFYRHDSIRLFSLELYCLVYYFYTISVSLI-MLGPELNWLCGRYYD 521
K Y+ SI++ SL L C+ + + L+ +L EL++ G Y++
Sbjct: 187 KIYKESSIQVTSLALLCVFLIYVAVGALLLPLLNGELDFFNGLYFN 232
>AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical
protein ZC190.5 protein.
Length = 311
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = -3
Query: 682 MIFIDFYLPKFYRHDSIRLFSLELYCLVYYFYTISVSLIMLGPELNWLCG------RYYD 521
M I+FY F SI +L ++ + F++ +V L+M+G + Y +
Sbjct: 1 MAMINFYFQAFSAMPSIIWSTLTVFESILVFHSFTVYLLMVGLSMTLFASYGFSIFEYLN 60
Query: 520 VKIPICIKXTFSILKKKNWCFINALNCALK 431
+ F+ L+ K W FI+ L+
Sbjct: 61 SSKYYALTPEFATLRSKTWEFIHEFGVCLQ 90
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXP 1383
PP G P P P P G P GGP P P P
Sbjct: 319 PPITGGPPPPPPP-GGLPPISGGPPPPPPPP 348
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 1474 PPXGGXPPPXPXPXPG 1427
PP GG PPP P P PG
Sbjct: 346 PPPGGCPPPPPPPPPG 361
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPP 1374
PP G P P P P G P P PG PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>Z92782-6|CAB07191.1| 319|Caenorhabditis elegans Hypothetical
protein F14F8.7 protein.
Length = 319
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = -3
Query: 730 QNRIYLHLIMLWLLYKMIFIDFYLPKFYRHDSIRLFSLELYCLVYYFYTISVSLIMLGPE 551
+ + YLHLI + + + IF + S+R ++ + + I ++ +
Sbjct: 20 ETKFYLHLINVAISFIGIFPSVFHFLVLLRKSMRQLTVNQFLIGIVVCGIIHNVCSIIYY 79
Query: 550 LNWLCGRYYDVKIPI-CIKXTFSILKKKNWCFINALNCALKLYFLKCXTHKMTFNRT 383
+ LC YY +K+P+ C+ S +K + F ++L ++ + + T M RT
Sbjct: 80 IPILCDHYYSLKVPLECVPSQSSYVKIA-YGFYSSLINSVAIVMITYFTAAMAIIRT 135
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476
KN GG G GP GPP P G G G GG
Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476
KN GG G GP GPP P G G G GG
Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical protein
K10C8.3c protein.
Length = 432
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476
KN GG G GP GPP P G G G GG
Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical protein
K10C8.3a protein.
Length = 445
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476
KN GG G GP GPP P G G G GG
Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239
>U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm receptor
protein 139 protein.
Length = 346
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 463 CFINALNCALKLYF-LKCXTHKMTFNRTK 380
CF+ + CALK+YF LK H M+ RTK
Sbjct: 212 CFLTIIFCALKIYFKLKEDIHSMS-ERTK 239
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 8.5
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = -3
Query: 1471 PXGGXPPPXPXPXPGXPQXXG-AXXXGLXFXXPPGFLRXPRXXXNPXQXPLPPG 1313
P GG PP P PG P G G PPG P P PPG
Sbjct: 179 PPGGVGPPGPNGTPGAPGDEGIPGVPGANVICPPG----PAGSMGSVGLPGPPG 228
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 1369 NRGGXGXXGPGXGPPXFGXXPAXGXGXGXG 1458
N GG G G G FG A G G G G
Sbjct: 112 NAGGTGFGGGNAGGTGFGSGNAGGTGLGSG 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,548,080
Number of Sequences: 27780
Number of extensions: 548177
Number of successful extensions: 2266
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4277144658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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