BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030723E4_A12_e377_02.seq (1488 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.91 AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.91 AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.91 U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.6 AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 31 1.6 AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 31 2.1 AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 31 2.1 AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine re... 31 2.1 L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 31 2.8 AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 2.8 Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical pr... 30 3.7 AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 3.7 U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 30 4.8 U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.8 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.8 AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 30 4.8 AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical ... 30 4.8 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.8 Z92782-6|CAB07191.1| 319|Caenorhabditis elegans Hypothetical pr... 29 6.4 Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 29 6.4 Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 29 6.4 Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 29 6.4 Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 29 6.4 U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm recep... 29 8.5 AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 8.5 AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 8.5 >AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform b protein. Length = 518 Score = 32.3 bits (70), Expect = 0.91 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXP--KXGGPXPGPXXPXPP 1374 PP G P P P AG P + G P P P PP Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282 Score = 29.9 bits (64), Expect = 4.8 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXP----GPXXPXPPR 1371 PPR G P P P P G P P P P PPR Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304 >AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform c protein. Length = 539 Score = 32.3 bits (70), Expect = 0.91 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXP--KXGGPXPGPXXPXPP 1374 PP G P P P AG P + G P P P PP Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303 Score = 29.9 bits (64), Expect = 4.8 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXP----GPXXPXPPR 1371 PPR G P P P P G P P P P PPR Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325 >AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform a protein. Length = 524 Score = 32.3 bits (70), Expect = 0.91 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXP--KXGGPXPGPXXPXPP 1374 PP G P P P AG P + G P P P PP Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288 Score = 29.9 bits (64), Expect = 4.8 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXP----GPXXPXPPR 1371 PPR G P P P P G P P P P PPR Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310 >U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein C01G8.9a protein. Length = 1724 Score = 31.5 bits (68), Expect = 1.6 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = -3 Query: 1474 PPXGGXPPPXPXPXPGXPQXXGAXXXGLXFXXPPGFLRXPRXXXNPXQXP--LPPG 1313 PP PP P P P PQ G PPG +R P P P PPG Sbjct: 707 PPQPQQPPQGP-PGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPG 761 >AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical protein Y55F3AR.2 protein. Length = 254 Score = 31.5 bits (68), Expect = 1.6 Identities = 17/36 (47%), Positives = 17/36 (47%) Frame = -2 Query: 1472 PRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPPRFF 1365 PRGG P P P AG G P P P P PR F Sbjct: 212 PRGGGPAPG-APRAGGSGAGGAPRPPP--PAGPRAF 244 >AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. Length = 139 Score = 31.1 bits (67), Expect = 2.1 Identities = 17/34 (50%), Positives = 17/34 (50%) Frame = +1 Query: 1375 GGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476 GG G GPG G P G P G G G G P GG Sbjct: 41 GGAGLGGPGIGGPGLG-GPGIG-GPGLGGPGVGG 72 >AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical protein F46E10.2 protein. Length = 139 Score = 31.1 bits (67), Expect = 2.1 Identities = 17/34 (50%), Positives = 17/34 (50%) Frame = +1 Query: 1375 GGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476 GG G GPG G P G P G G G G P GG Sbjct: 41 GGAGLGGPGIGGPGLG-GPGIG-GPGLGGPGVGG 72 >AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine receptor, class h protein83 protein. Length = 352 Score = 31.1 bits (67), Expect = 2.1 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = -2 Query: 587 YYIGELNYVRTRIKLVVWKIL*CENTYLY*MXVFYIKKKKLVLYQCFKL---RIKIIFFK 417 + +G LN++R K+ VW + N L+ M + + +L+ F++ R KII++ Sbjct: 87 FSVGLLNFLRVPPKIQVWLVFQSLNWMLFSMTMLLENRHNSILFNRFQITKNRTKIIYYL 146 Query: 416 V 414 V Sbjct: 147 V 147 >L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen protein. Length = 308 Score = 30.7 bits (66), Expect = 2.8 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -3 Query: 1198 SXPFXTXFCFXXPKGMGFXPXGXPGGIGPXGXAXP 1094 + P + FCF P G P G PGG GP G P Sbjct: 151 AAPTASDFCFDCPPG----PAGPPGGPGPPGPPGP 181 >AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical protein F59E12.9 protein. Length = 1621 Score = 30.7 bits (66), Expect = 2.8 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -2 Query: 1475 PPRGGXPXPXPXP-XAGXXPKXGGPXPGPXXP 1383 PPRGG P P G P+ G P PGP P Sbjct: 1575 PPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPP 1606 >Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical protein Y37A1A.2 protein. Length = 477 Score = 30.3 bits (65), Expect = 3.7 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = +3 Query: 363 LNYSLVFVLLKVILCVQHFKKYNFNAQFKALIKH--QFFFFNIENVHLIQIGIFTS*YLP 536 L ++ +F +L V HF + F+ F +H Q +F++ + ++ + +FT +LP Sbjct: 150 LGHTSLFFGGVTMLFVFHFVPHTFDGHFLNFDEHVVQVIYFSLMTLTVVSVVLFT--FLP 207 Query: 537 HNQFNS 554 QF+S Sbjct: 208 TKQFDS 213 >AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical protein Y53C10A.10 protein. Length = 1582 Score = 30.3 bits (65), Expect = 3.7 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 6/39 (15%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKX------GGPXPGPXXPXP 1377 P GG P P P P P GGP PGP P P Sbjct: 1437 PSTGGDPSPGPSPNGPSNPSVPESSTGGGPSPGP-APDP 1474 >U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of potassium channelsprotein 16 protein. Length = 555 Score = 29.9 bits (64), Expect = 4.8 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -3 Query: 655 KFYRHDSIRLFSLELYCLVYYFYTISVSLI-MLGPELNWLCGRYYD 521 K Y+ SI++ SL L C+ + + L+ +L EL++ G Y++ Sbjct: 187 KIYKESSIQVTSLALLCVFLIYVAVGALLLPLLNGELDFFNGLYFN 232 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 29.9 bits (64), Expect = 4.8 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXP 1383 PP G P P P P G P GGP P P P Sbjct: 736 PPITGGPPPPPPP-GGLPPISGGPPPPPPPP 765 Score = 29.9 bits (64), Expect = 4.8 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -3 Query: 1474 PPXGGXPPPXPXPXPG 1427 PP GG PPP P P PG Sbjct: 763 PPPGGCPPPPPPPPPG 778 Score = 29.5 bits (63), Expect = 6.4 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPP 1374 PP G P P P P G P P PG PP Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 29.9 bits (64), Expect = 4.8 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXP 1383 PP G P P P P G P GGP P P P Sbjct: 736 PPITGGPPPPPPP-GGLPPISGGPPPPPPPP 765 Score = 29.9 bits (64), Expect = 4.8 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -3 Query: 1474 PPXGGXPPPXPXPXPG 1427 PP GG PPP P P PG Sbjct: 763 PPPGGCPPPPPPPPPG 778 Score = 29.5 bits (63), Expect = 6.4 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPP 1374 PP G P P P P G P P PG PP Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785 >AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium channel subunit n2P16 protein. Length = 555 Score = 29.9 bits (64), Expect = 4.8 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -3 Query: 655 KFYRHDSIRLFSLELYCLVYYFYTISVSLI-MLGPELNWLCGRYYD 521 K Y+ SI++ SL L C+ + + L+ +L EL++ G Y++ Sbjct: 187 KIYKESSIQVTSLALLCVFLIYVAVGALLLPLLNGELDFFNGLYFN 232 >AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical protein ZC190.5 protein. Length = 311 Score = 29.9 bits (64), Expect = 4.8 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 6/90 (6%) Frame = -3 Query: 682 MIFIDFYLPKFYRHDSIRLFSLELYCLVYYFYTISVSLIMLGPELNWLCG------RYYD 521 M I+FY F SI +L ++ + F++ +V L+M+G + Y + Sbjct: 1 MAMINFYFQAFSAMPSIIWSTLTVFESILVFHSFTVYLLMVGLSMTLFASYGFSIFEYLN 60 Query: 520 VKIPICIKXTFSILKKKNWCFINALNCALK 431 + F+ L+ K W FI+ L+ Sbjct: 61 SSKYYALTPEFATLRSKTWEFIHEFGVCLQ 90 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 29.9 bits (64), Expect = 4.8 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXP 1383 PP G P P P P G P GGP P P P Sbjct: 319 PPITGGPPPPPPP-GGLPPISGGPPPPPPPP 348 Score = 29.9 bits (64), Expect = 4.8 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -3 Query: 1474 PPXGGXPPPXPXPXPG 1427 PP GG PPP P P PG Sbjct: 346 PPPGGCPPPPPPPPPG 361 Score = 29.5 bits (63), Expect = 6.4 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = -2 Query: 1475 PPRGGXPXPXPXPXAGXXPKXGGPXPGPXXPXPP 1374 PP G P P P P G P P PG PP Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368 >Z92782-6|CAB07191.1| 319|Caenorhabditis elegans Hypothetical protein F14F8.7 protein. Length = 319 Score = 29.5 bits (63), Expect = 6.4 Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 1/117 (0%) Frame = -3 Query: 730 QNRIYLHLIMLWLLYKMIFIDFYLPKFYRHDSIRLFSLELYCLVYYFYTISVSLIMLGPE 551 + + YLHLI + + + IF + S+R ++ + + I ++ + Sbjct: 20 ETKFYLHLINVAISFIGIFPSVFHFLVLLRKSMRQLTVNQFLIGIVVCGIIHNVCSIIYY 79 Query: 550 LNWLCGRYYDVKIPI-CIKXTFSILKKKNWCFINALNCALKLYFLKCXTHKMTFNRT 383 + LC YY +K+P+ C+ S +K + F ++L ++ + + T M RT Sbjct: 80 IPILCDHYYSLKVPLECVPSQSSYVKIA-YGFYSSLINSVAIVMITYFTAAMAIIRT 135 >Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical protein K10C8.3c protein. Length = 432 Score = 29.5 bits (63), Expect = 6.4 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = +1 Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476 KN GG G GP GPP P G G G GG Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239 >Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical protein K10C8.3a protein. Length = 445 Score = 29.5 bits (63), Expect = 6.4 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = +1 Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476 KN GG G GP GPP P G G G GG Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239 >Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical protein K10C8.3c protein. Length = 432 Score = 29.5 bits (63), Expect = 6.4 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = +1 Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476 KN GG G GP GPP P G G G GG Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239 >Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical protein K10C8.3a protein. Length = 445 Score = 29.5 bits (63), Expect = 6.4 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = +1 Query: 1366 KNRGGXGXXGPGXGPPXFGXXPAXGXGXGXGXPPRGG 1476 KN GG G GP GPP P G G G GG Sbjct: 204 KNAGGNGPSGP-DGPPPPPSNPYGGSGNDNGSSGGGG 239 >U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm receptor protein 139 protein. Length = 346 Score = 29.1 bits (62), Expect = 8.5 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -3 Query: 463 CFINALNCALKLYF-LKCXTHKMTFNRTK 380 CF+ + CALK+YF LK H M+ RTK Sbjct: 212 CFLTIIFCALKIYFKLKEDIHSMS-ERTK 239 >AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical protein Y81G3A.5 protein. Length = 323 Score = 29.1 bits (62), Expect = 8.5 Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%) Frame = -3 Query: 1471 PXGGXPPPXPXPXPGXPQXXG-AXXXGLXFXXPPGFLRXPRXXXNPXQXPLPPG 1313 P GG PP P PG P G G PPG P P PPG Sbjct: 179 PPGGVGPPGPNGTPGAPGDEGIPGVPGANVICPPG----PAGSMGSVGLPGPPG 228 >AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line helicase protein 2 protein. Length = 974 Score = 29.1 bits (62), Expect = 8.5 Identities = 13/30 (43%), Positives = 13/30 (43%) Frame = +1 Query: 1369 NRGGXGXXGPGXGPPXFGXXPAXGXGXGXG 1458 N GG G G G FG A G G G G Sbjct: 112 NAGGTGFGGGNAGGTGFGSGNAGGTGLGSG 141 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,548,080 Number of Sequences: 27780 Number of extensions: 548177 Number of successful extensions: 2266 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2065 length of database: 12,740,198 effective HSP length: 84 effective length of database: 10,406,678 effective search space used: 4277144658 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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