Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A10_e361_02.seq
(1500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 38 0.018
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 35 0.13
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 35 0.13
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 35 0.13
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 34 0.30
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 33 0.69
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 0.92
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 31 1.6
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 31 2.1
U13875-13|AAA21156.2| 470|Caenorhabditis elegans Hypothetical p... 31 2.1
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 31 2.1
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 31 2.8
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 31 2.8
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 31 2.8
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 2.8
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 30 3.7
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 30 3.7
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 30 3.7
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 30 3.7
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 30 3.7
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 30 4.9
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 30 4.9
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 30 4.9
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 30 4.9
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.5
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 29 6.5
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 6.5
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 6.5
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 6.5
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 6.5
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 29 6.5
AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated... 29 6.5
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 29 6.5
AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated... 29 6.5
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 6.5
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 6.5
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 29 6.5
Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical pr... 29 8.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 8.6
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 8.6
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 8.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 8.6
AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical ... 29 8.6
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 8.6
AF022975-10|AAB70668.2| 661|Caenorhabditis elegans Hypothetical... 29 8.6
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 37.9 bits (84), Expect = 0.018
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 5/114 (4%)
Frame = -3
Query: 691 NQGGQPAQNEPFQ-NFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG----NGAAPSEKPA 527
N+ G NEP N P PN+PG +P++ + G NG + KP
Sbjct: 1068 NKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPG 1127
Query: 526 ENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRIQSTINNPEKPRETVEKNE 365
N P PN+ GP ++P +G P P E+ + N+
Sbjct: 1128 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNESSDPNK 1181
Score = 37.9 bits (84), Expect = 0.018
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = -3
Query: 691 NQGGQPAQNEPFQ-NFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG----NGAAPSEKPA 527
N+ G NEP N P + PN+PG P++ + G NG + KP
Sbjct: 1250 NKPGPNGPNEPSDPNRPGPNGPNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPG 1309
Query: 526 ENKPEPEIKPNQSGP 482
N P PN+ GP
Sbjct: 1310 PNGPNEPSDPNKPGP 1324
Score = 37.1 bits (82), Expect = 0.032
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = -3
Query: 676 PAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG-NGAAPSEKPAENKPEPEIK 500
P P N P N S P+ G P + G NG + KP+ N P +K
Sbjct: 942 PGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPVK 1001
Query: 499 PNQSGP 482
P+ SGP
Sbjct: 1002 PSPSGP 1007
Score = 35.9 bits (79), Expect = 0.075
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQG----NGAAPSEKPAENKPEPEIKPNQSGP 482
PN+PG S P++ + G NG + KP N P PN+ GP
Sbjct: 1221 PNKPGPNGSNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNRPGP 1268
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQG----NGAAPSEKPAENKPEPEIKPNQSGP 482
PN+PG +P++ + G NG + KP N P PN+ GP
Sbjct: 1067 PNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGP 1114
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQG----NGAAPSEKPAENKPEPEIKPNQSGP 482
PN+PG +P++ + G NG + KP N P PN+ GP
Sbjct: 1179 PNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGP 1226
Score = 35.1 bits (77), Expect = 0.13
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = -3
Query: 691 NQGGQPAQNEPFQ-NFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG-NGA-APSE--KPA 527
N+ G NEP N P PN+PG P++ + G NG PS+ KP
Sbjct: 1306 NKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPG 1365
Query: 526 ENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRIQSTINNPEKP 389
N P PN+ GP N V +S +G + N P P
Sbjct: 1366 PNGPNGSSDPNKPGPNGP--SNPSVPESSTGGGPSPGPSPNEPSNP 1409
Score = 34.3 bits (75), Expect = 0.23
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQG----NGAAPSEKPAENKPEPEIKPNQSGP 482
PN+PG P++ + G NG + KP N P PN+ GP
Sbjct: 1137 PNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNESSDPNKPGP 1184
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = -3
Query: 691 NQGGQPAQNEPFQ-NFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG----NGAAPSEKPA 527
N+ G NEP N P PN+PG P++ + G N ++ KP
Sbjct: 1124 NKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNESSDPNKPG 1183
Query: 526 ENKPEPEIKPNQSGP 482
N P PN+ GP
Sbjct: 1184 PNGPNEPSDPNKPGP 1198
Score = 32.3 bits (70), Expect = 0.92
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -3
Query: 676 PAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG-NGAAPSEKPAENKPEPEIK 500
P+ N P N P N S P+ G P + G NG + KP N P
Sbjct: 1022 PSPNGPSPNGP-TPNWPSPNGPSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSD 1080
Query: 499 PNQSGP 482
PN+ GP
Sbjct: 1081 PNKPGP 1086
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 682 GQPAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQG-NGAAPSEKPAENKPEPE 506
G N+P N P PN+PG P++ + NG + KP+ + P P
Sbjct: 951 GPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPN 1010
Query: 505 IKPNQSGP 482
P+ +GP
Sbjct: 1011 -GPSPNGP 1017
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 35.1 bits (77), Expect = 0.13
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Frame = -3
Query: 718 NPLNLNQATNQGGQPAQNEPFQNF---PFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGA 548
+P + + + G P +EP Q P + P RP + P + T + A
Sbjct: 648 DPFGWDSSGHTGDAPTASEPVQELSPTPEASSSTGTSAPARPPPARPEAPKKDETAVDAA 707
Query: 547 APSEKPAENKPEP-------EIKPNQSGPIRQL-LENNPVVQSISGTVQRIQSTINNPEK 392
AP P +P P + KP + P + + + +S V+ +ST+ N E
Sbjct: 708 APPRPPPAARPPPPRPAPANKEKPKEPEPEEDAWAQFKRMTEKVSTAVKSTESTLKNLE- 766
Query: 391 PRETVEKNETEQE 353
ET N+ + E
Sbjct: 767 --ETSAANDIKDE 777
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 607 RPGAQSSQKPTETSTQGNGAAPSEK--PAENKPEPE 506
+P Q+ QKPT+TS+Q + P K PA+ +PE E
Sbjct: 1030 KPSLQALQKPTDTSSQSTSSEPPPKKEPADEQPERE 1065
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 607 RPGAQSSQKPTETSTQGNGAAPSEK--PAENKPEPE 506
+P Q+ QKPT+TS+Q + P K PA+ +PE E
Sbjct: 1030 KPSLQALQKPTDTSSQSTSSEPPPKKEPADEQPERE 1065
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.30
Identities = 20/82 (24%), Positives = 29/82 (35%)
Frame = -3
Query: 742 QNFQAFLANPLNLNQATNQGGQPAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETST 563
Q F+ L ++ + +Q + + +S P RP Q KP E +
Sbjct: 136 QKINEFIREQLKKQKSNENVSEMSQRSAPRTAASTRTAISAPPPPRPPPQEPPKPVEQAA 195
Query: 562 QGNGAAPSEKPAENKPEPEIKP 497
AP P E PEP P
Sbjct: 196 PPPPPAPMPVPVEKAPEPVPAP 217
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 32.7 bits (71), Expect = 0.69
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = -3
Query: 703 NQATNQGGQPAQNEPFQNFPFIQNVVSLIQPNRPGAQ-SSQKPTETSTQGNGAAPSEKPA 527
NQ N G P Q +P Q+ QN ++ P + + Q+P Q NG P +
Sbjct: 701 NQNMNNGS-PHQQQPLQHQQMQQNAPNMNMPPQQQIRIQQQEPQMLQGQTNGPPPPHQQQ 759
Query: 526 ENKP----EPEIKP-NQSGPIRQLLENNPVVQSISGTVQRIQSTINNPEKPRETVEKNET 362
+ +P + +P N P RQ+ QSI G++Q N+P+ P+ +
Sbjct: 760 QQQPVRVAQVAQQPQNMQIPPRQMTPQQS--QSIHGSMQ------NSPQNPQMRMNLAPP 811
Query: 361 EQEK 350
+Q++
Sbjct: 812 QQQQ 815
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.92
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -3
Query: 688 QGGQPAQNEPFQNFPFIQNVVSLIQPN-RPGAQSSQKPTETSTQGNGAAPSEKPAENKPE 512
Q P+Q + Q P +Q + Q + +P AQ Q+ + P
Sbjct: 204 QQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVVQAPPKPIVQQAPVVQQAPP 263
Query: 511 PEIKPNQSGPIRQLLENNPVVQSISGTVQR 422
P+ + Q+ P++Q PVVQ S VQ+
Sbjct: 264 PKQQQAQAQPVQQPPNPAPVVQQASAPVQQ 293
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 631 VVSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEP 509
V++ Q + + +QKP+ T+ N PS+KPA+ P+P
Sbjct: 365 VIARSQKSEASTKIAQKPSPTNPTVNFKQPSQKPADLTPKP 405
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -3
Query: 721 ANPLNLNQATNQGGQPAQNEPFQNFPFIQNVV---SLIQPNRPGAQ 593
A+PL++ A + Q ++EP QNF +QN V + IQP +P AQ
Sbjct: 567 ADPLHVQHAVDPSRQLVESEPVQNFVPLQNTVGGNAYIQP-QPVAQ 611
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -3
Query: 721 ANPLNLNQATNQGGQPAQNEPFQNFPFIQNVV---SLIQPNRPGAQ 593
A+PL++ A + Q ++EP QNF +QN V + IQP +P AQ
Sbjct: 212 ADPLHVQHAVDPSRQLVESEPVQNFVPLQNTVGGNAYIQP-QPVAQ 256
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -3
Query: 721 ANPLNLNQATNQGGQPAQNEPFQNFPFIQNVV---SLIQPNRPGAQ 593
A+PL++ A + Q ++EP QNF +QN V + IQP +P AQ
Sbjct: 164 ADPLHVQHAVDPSRQLVESEPVQNFVPLQNTVGGNAYIQP-QPVAQ 208
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQG--NGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSI 440
PN+ ++ S K ++ G G+APS +P+EN+ E + S ++L + P +
Sbjct: 213 PNKGSSEKSSKWSDDHASGYPEGSAPSAEPSENQYEQDGSIPSSNDYKELTD-VPGTKP- 270
Query: 439 SGTVQRIQSTINNPEKPRETVE 374
S + R + NP P T +
Sbjct: 271 SSSASRGSNMAGNPTAPLTTTQ 292
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -3
Query: 721 ANPLNLNQATNQGGQPAQNEPFQNFPFIQNVV---SLIQPNRPGAQ 593
A+PL++ A + Q ++EP QNF +QN V + IQP +P AQ
Sbjct: 892 ADPLHVQHAVDPSRQLVESEPVQNFVPLQNTVGGNAYIQP-QPVAQ 936
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 31.1 bits (67), Expect = 2.1
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Frame = -3
Query: 739 NFQAFLANPLNLNQATNQGGQPAQNEPFQNFPF-IQNVVSLIQPNRPGAQSSQKPTETST 563
NFQ+FL A+N QN+ + P +Q +++ +Q + + S++P+ +
Sbjct: 27 NFQSFLQLLHIFKMASNSTNSKKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKP 86
Query: 562 QGN-----------GAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQS-ISGTVQRI 419
+ N +AP+ P E K +P+ + + ++Q EN + Q+ V
Sbjct: 87 KKNEKRKKAVAQAPASAPAPGPEEKKKQPK-RASVGARMQQQAENARISQTKRPRQVSTS 145
Query: 418 QSTINNPEKPRETVEKNETEQEKG 347
+ + N P + + + +Q KG
Sbjct: 146 KGSSRNTTAPEQQNYQQQQQQYKG 169
>U13875-13|AAA21156.2| 470|Caenorhabditis elegans Hypothetical
protein C26E6.2 protein.
Length = 470
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 646 PFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKP 497
P Q + + RP A SS T T+ +G + + + + EPE KP
Sbjct: 97 PQSQTSQLISEDTRPSASSSPSSTATAVSNSGQSNATSTSSSSTEPEYKP 146
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 31.1 bits (67), Expect = 2.1
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Frame = -3
Query: 739 NFQAFLANPLNLNQATNQGGQPAQNEPFQNFPF-IQNVVSLIQPNRPGAQSSQKPTETST 563
NFQ+FL A+N QN+ + P +Q +++ +Q + + S++P+ +
Sbjct: 27 NFQSFLQLLHIFKMASNSTNSKKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQPSTSKP 86
Query: 562 QGN-----------GAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQS-ISGTVQRI 419
+ N +AP+ P E K +P+ + + ++Q EN + Q+ V
Sbjct: 87 KKNEKRKKAVAQAPASAPAPGPEEKKKQPK-RASVGARMQQQAENARISQTKRPRQVSTS 145
Query: 418 QSTINNPEKPRETVEKNETEQEKG 347
+ + N P + + + +Q KG
Sbjct: 146 KGSSRNTTAPEQQNYQQQQQQYKG 169
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 700 QATNQGGQPAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPA-E 524
Q T G QN+ ++ +V+ + NR SS PT ST E+ +
Sbjct: 482 QTTPTGSTELQNDRRDKSVYVSTIVTKVVDNRKKVSSSNSPTTVSTNKTAVIEDEEDVKK 541
Query: 523 NKP 515
N P
Sbjct: 542 NSP 544
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 30.7 bits (66), Expect = 2.8
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGA-APSEKPAENKPEPEIKPN-QSGPIRQLLENNPVVQSI 440
PN Q+ Q S NG AP+++ A+N P + PN Q+ + +N+ Q+
Sbjct: 712 PNDANGQNVQIDRNDSNAQNGQNAPNDQNAQNDPNAQNAPNVQNSQNTRNAQNSQNAQN- 770
Query: 439 SGTVQRIQSTINNPEKPRETVEKN 368
+ Q N+P P + +N
Sbjct: 771 ARNAPNAQIAQNDPNAPNAQIAQN 794
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PGA Q T + GN P E A+ P + +P SGP
Sbjct: 194 PGQPGAPG-QVRTVPAPPGNPGQPGEPGAQGPPGEDGRPGNSGP 236
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -3
Query: 583 KPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRIQSTIN 404
+PT TST AAPS + + P P P +G N P S + Q + S+ +
Sbjct: 226 EPTTTSTA--YAAPSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTS 283
Query: 403 NPEKPRET 380
+ P T
Sbjct: 284 STSSPAPT 291
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 598 AQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRI 419
A +Q TST + ++ E ++ P+ + + + LL+N P S V++
Sbjct: 562 APRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEELVPTLLQNKPTHVESSSPVEKK 621
Query: 418 QSTINNPEKP 389
T N EKP
Sbjct: 622 PPTKTNVEKP 631
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 30.3 bits (65), Expect = 3.7
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = -3
Query: 580 PTETSTQGNGA-APSEKPAENKPEPEIKPNQSGPIRQLL------ENNPVVQSISGTVQR 422
P +TQG + P P+ ++ E G R+ L +N +V S +Q
Sbjct: 450 PQVNTTQGTSSETPPVNPSYSQLSTEELRRMEGESREALLARLQAMDNIMVLLESAQMQM 509
Query: 421 IQSTINNPEKPRETVEKNETEQEKGG 344
IQ P +PR V +E+EQE G
Sbjct: 510 IQLATVTPIRPRPVVPSDESEQEAPG 535
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 30.3 bits (65), Expect = 3.7
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = -3
Query: 646 PFIQNV--VSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQ 473
P + NV + I P +P S P+E PS P P P + IR
Sbjct: 1685 PPVDNVRLIRPITPAQPPITQSPVPSEPVVV---RTPSPVPQPTPPPPPPPVREEWVIRD 1741
Query: 472 LLENNPVVQS-ISGTVQRIQSTINNPEKPRETVEK 371
+E +PV Q I G+ ++ + + P +P EK
Sbjct: 1742 SVERDPVTQGRIRGSFRK-EPLVPQPPRPPVVAEK 1775
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 598 AQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRI 419
A +Q TST + ++ E ++ P+ + + + LL+N P S V++
Sbjct: 562 APRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEELVPTLLQNKPTHVESSSPVEKK 621
Query: 418 QSTINNPEKP 389
T N EKP
Sbjct: 622 PPTKTNVEKP 631
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 3.7
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = -3
Query: 688 QGGQPAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEP 509
+G QN+ QN NV + Q+ + S +G GA E+ E E
Sbjct: 151 RGDSHPQNQSRQNNRNQLNVDRIANQQNKSVQNPSRNPGNSRRGQGARRREQKEEPLTEE 210
Query: 508 EIKPNQSGPIRQ----LLENN 458
E K P+R+ LLENN
Sbjct: 211 ETKILADKPLREGLVYLLENN 231
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 598 AQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRI 419
A +Q TST + ++ E ++ P+ + + + LL+N P S V++
Sbjct: 562 APRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEELVPTLLQNKPTHVESSSPVEKK 621
Query: 418 QSTINNPEKP 389
T N EKP
Sbjct: 622 PPTKTNVEKP 631
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 598 AQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRI 419
A +Q TST + ++ E ++ P+ + + + LL+N P S V++
Sbjct: 562 APRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEELVPTLLQNKPTHVESSSPVEKK 621
Query: 418 QSTINNPEKP 389
T N EKP
Sbjct: 622 PPTKTNVEKP 631
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPI 479
P+ P ++ S T + + A P+E PA+N+ + + P +S P+
Sbjct: 368 PSPPASRRSVSRTTQPSTSSFATPTEPPAKNQRKRRVVPPKSEPV 412
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 604 PGAQSSQKPTETSTQGNGAA--PSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGT 431
P A+ +KP ET +EKP E K +P P Q +Q L N + I+ T
Sbjct: 23 PSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPKQKQKQKQNLNNKFLKNLITDT 82
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 604 PGAQSSQKPTETSTQGNGAA--PSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGT 431
P A+ +KP ET +EKP E K +P P Q +Q L N + I+ T
Sbjct: 23 PSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPKQKQKQKQNLNNKFLKNLITDT 82
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 604 PGAQSSQKPTETSTQGNGAA--PSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGT 431
P A+ +KP ET +EKP E K +P P Q +Q L N + I+ T
Sbjct: 23 PSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPKQKQKQKQNLNNKFLKNLITDT 82
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 29.9 bits (64), Expect = 4.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 577 TETSTQGNGAAPSEKPAENKPEPEIKPNQS 488
+ TS+ PS P P+PEI+PN+S
Sbjct: 69 SSTSSTNKSPIPSSSPVLPPPQPEIEPNRS 98
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 616 QPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQS-I 440
QP+ + ++K + Q +AP+ P E K +P+ + + ++Q EN + Q+
Sbjct: 57 QPSTSKPKKNEKRKKAVAQAPASAPAPGPEEKKKQPK-RASVGARMQQQAENARISQTKR 115
Query: 439 SGTVQRIQSTINNPEKPRETVEKNETEQEKG 347
V + + N P + + + +Q KG
Sbjct: 116 PRQVSTSKGSSRNTTAPEQQNYQQQQQQYKG 146
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP +GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP +GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP +GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 616 QPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQS-I 440
QP+ + ++K + Q +AP+ P E K +P+ + + ++Q EN + Q+
Sbjct: 41 QPSTSKPKKNEKRKKAVAQAPASAPAPGPEEKKKQPK-RASVGARMQQQAENARISQTKR 99
Query: 439 SGTVQRIQSTINNPEKPRETVEKNETEQEKG 347
V + + N P + + + +Q KG
Sbjct: 100 PRQVSTSKGSSRNTTAPEQQNYQQQQQQYKG 130
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP +GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP +GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.5 bits (63), Expect = 6.5
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 691 NQGGQPAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKP 515
NQG P ++ QN+P +Q S QP+ Q+P STQG G + + P
Sbjct: 105 NQGCVPKYHQRNQNYPQLQPKYSYFQPH-------QRPIFNSTQGYGTYSVRRSSPPSP 156
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P+ P ++ S T + + A P+E PA+NK + P +S P
Sbjct: 1278 PSPPASRRSVSRTTQPSTSSFATPTEPPAKNKRMRSVVPPKSEP 1321
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -3
Query: 616 QPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQS-I 440
QP+ + ++K + Q +AP+ P E K +P+ + + ++Q EN + Q+
Sbjct: 57 QPSTSKPKKNEKRKKAVAQAPASAPAPGPEEKKKQPK-RASVGARMQQQAENARISQTKR 115
Query: 439 SGTVQRIQSTINNPEKPRETVEKNETEQEKG 347
V + + N P + + + +Q KG
Sbjct: 116 PRQVSTSKGSSRNTTAPEQQNYQQQQQQYKG 146
>AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated
protein 23, isoform b protein.
Length = 399
Score = 29.5 bits (63), Expect = 6.5
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 6/98 (6%)
Frame = -3
Query: 619 IQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSI 440
+ PN P + PT TSTQ + +N+ P+ Q +Q P ++
Sbjct: 66 LSPNPPMQGYRRSPTPTSTQSPTSTLRRNSQQNQAPPQYSQQQPQQAQQRQTTPPSTKAS 125
Query: 439 SGTVQRIQSTINNPEKPRETV------EKNETEQEKGG 344
S R + PE P EK E EK G
Sbjct: 126 SRPPSRTREP-KEPEVPERPAVIPLPYEKKEKPLEKKG 162
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 29.5 bits (63), Expect = 6.5
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 6/98 (6%)
Frame = -3
Query: 619 IQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSI 440
+ PN P + PT TSTQ + +N+ P+ Q +Q P ++
Sbjct: 124 LSPNPPMQGYRRSPTPTSTQSPTSTLRRNSQQNQAPPQYSQQQPQQAQQRQTTPPSTKAS 183
Query: 439 SGTVQRIQSTINNPEKPRETV------EKNETEQEKGG 344
S R + PE P EK E EK G
Sbjct: 184 SRPPSRTREP-KEPEVPERPAVIPLPYEKKEKPLEKKG 220
>AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated
protein 23, isoform a protein.
Length = 458
Score = 29.5 bits (63), Expect = 6.5
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 6/98 (6%)
Frame = -3
Query: 619 IQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSI 440
+ PN P + PT TSTQ + +N+ P+ Q +Q P ++
Sbjct: 125 LSPNPPMQGYRRSPTPTSTQSPTSTLRRNSQQNQAPPQYSQQQPQQAQQRQTTPPSTKAS 184
Query: 439 SGTVQRIQSTINNPEKPRETV------EKNETEQEKGG 344
S R + PE P EK E EK G
Sbjct: 185 SRPPSRTREP-KEPEVPERPAVIPLPYEKKEKPLEKKG 221
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P+ P ++ S T + + A P+E PA+NK + P +S P
Sbjct: 1262 PSPPASRRSVSRTTQPSTSSFATPTEPPAKNKRMRSVVPPKSEP 1305
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 6.5
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 691 NQGGQPAQNEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKP 515
NQG P ++ QN+P +Q S QP+ Q+P STQG G + + P
Sbjct: 105 NQGCVPKYHQRNQNYPQLQPKYSYFQPH-------QRPIFNSTQGYGTYSVRRSSPPSP 156
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 616 QPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
+P RP + P E G+ A + P + +P QSGP
Sbjct: 195 EPGRPAQSTPSTPGEPGNPGDAGATGAPGDDGAPGRDGQPGQSGP 239
>Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical
protein M195.4 protein.
Length = 142
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 616 QPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIK-PNQS 488
+ +PG ++ + P +G GAA + KP PEIK P +S
Sbjct: 37 EEKKPGDEN-KNPAAVGAEGAGAAEKPQDKSQKPFPEIKMPTES 79
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGP 152
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -3
Query: 646 PFIQNVVSLIQPNRPGAQSSQKPTETSTQG----NGAAPSEKPAENKPEPEIKPNQSGPI 479
PF+ V + ++ +S PT S AP+EKP++ P ++ + S P
Sbjct: 64 PFVDKVFEALT-SKSYMPASTAPTSASATAPDLKKEKAPAEKPSKPTAPPGVQKSSSSPS 122
Query: 478 RQLLENNPVVQSIS 437
E+ P+ + IS
Sbjct: 123 ASKAESRPLRKRIS 136
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 613 PNRPGAQSSQ-KPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P PG+ KP GN P ++P E P KP GP
Sbjct: 100 PGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGP 144
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -3
Query: 613 PNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
P +PG KP GN P ++P E P KP GP
Sbjct: 111 PGKPGRPG--KPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGP 152
>AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical
protein F36F12.8 protein.
Length = 272
Score = 29.1 bits (62), Expect = 8.6
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -3
Query: 715 PLNLNQATNQGGQPAQ--NEPFQNFPFIQNVVSLIQPNRPGAQSSQKPTETSTQGNGAAP 542
P + N G P P Q F N L+ + + S+ + +S +G+
Sbjct: 124 PGDANPIAKSGNSPGSLLKSPIQRAGFKLN--RLLNKSLSPSTSNSTTSSSSRDASGSPQ 181
Query: 541 SEKPAENKPEPEIKPNQSGPIRQLLENNPV 452
E + +PEPE +PN+ + NN V
Sbjct: 182 PELELKLEPEPEPEPNEEALEYKRFFNNAV 211
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 616 QPNRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGP 482
+P RPG KP GN P ++P E P P +GP
Sbjct: 101 EPGRPGRPG--KPGVPGMPGNPGKPPQQPCELVTPPPCSPCPAGP 143
>AF022975-10|AAB70668.2| 661|Caenorhabditis elegans Hypothetical
protein K09C6.1 protein.
Length = 661
Score = 29.1 bits (62), Expect = 8.6
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = -3
Query: 598 AQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRI 419
A SS + G A KPAE P E + + +E + R+
Sbjct: 401 ASSSDGRKKPKNAGKSAERKGKPAEKNPSSEKDDDGATEPMSGVERRSTPSDVVNEKGRV 460
Query: 418 QSTINNPEKPRETVEKNETEQEKGGI 341
+ +PEK ++ ++N+TE++ I
Sbjct: 461 KG---DPEKQKQDRKENKTEEQNSKI 483
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,478,851
Number of Sequences: 27780
Number of extensions: 453367
Number of successful extensions: 1558
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4318771370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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