Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A10_e361_02.seq
(1500 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.73
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.73
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.73
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.73
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 26 0.97
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 5.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 6.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 6.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 6.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 6.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 9.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 9.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 9.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 9.0
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.73
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV S+ + + +VPLI + + +MF + SS V
Sbjct: 226 LTLGVTILLSL-----TVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVV 273
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.73
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV S+ + + +VPLI + + +MF + SS V
Sbjct: 226 LTLGVTILLSL-----TVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVV 273
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.73
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV S+ + + +VPLI + + +MF + SS V
Sbjct: 226 LTLGVTILLSL-----TVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVV 273
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.73
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV S+ + + +VPLI + + +MF + SS V
Sbjct: 294 LTLGVTILLSL-----TVFLNLVAESMPTTSDAVPLIGSYFNCIMFMVASSVV 341
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 25.8 bits (54), Expect = 0.97
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = -3
Query: 559 GNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGTVQRIQSTINNPEKPRET 380
G GAA S+ N P P+ + + ++ NP Q ++ Q+ Q N P T
Sbjct: 79 GKGAARSDDWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQQQQHNNGYASPMST 138
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 23.4 bits (48), Expect = 5.2
Identities = 17/75 (22%), Positives = 29/75 (38%)
Frame = -3
Query: 610 NRPGAQSSQKPTETSTQGNGAAPSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQSISGT 431
N+ +K T + + N ++KP E PE+ PN + L EN +
Sbjct: 123 NQDNRNDRRKKTFAAREDNDEEEAQKPKEQYIPPEL-PNDE---KSLFENGVEIGINFDK 178
Query: 430 VQRIQSTINNPEKPR 386
IQ ++ P+
Sbjct: 179 YDNIQVNVSGDNVPQ 193
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 6.8
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV ++ + ++PL+ + + +MF + SS V
Sbjct: 226 LTLGVTILLSL-----TVFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVV 273
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 6.8
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV ++ + ++PL+ + + +MF + SS V
Sbjct: 226 LTLGVTILLSL-----TVFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVV 273
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 6.8
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV ++ + ++PL+ + + +MF + SS V
Sbjct: 226 LTLGVTILLSL-----TVFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVV 273
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 6.8
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 114 ITILFTLILNLKHM*STFLSHLVIYSVFSGTGSVPLISAKLSSVMFSLISSAV 272
+T+ T++L+L T +LV ++ + ++PL+ + + +MF + SS V
Sbjct: 294 LTLGVTILLSL-----TVFLNLVAETLPQVSDAIPLLGSYFNCIMFMVASSVV 341
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 912 RIILTKGXKGPEILE 956
R+IL+ G K P +LE
Sbjct: 634 RVILSSGAKSPTVLE 648
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 912 RIILTKGXKGPEILE 956
R+IL+ G K P +LE
Sbjct: 634 RVILSSGAKSPTVLE 648
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/35 (22%), Positives = 18/35 (51%)
Frame = -3
Query: 547 APSEKPAENKPEPEIKPNQSGPIRQLLENNPVVQS 443
+P + P++ P+++ P+ L N ++QS
Sbjct: 402 SPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALIQS 436
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 9.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 912 RIILTKGXKGPEILE 956
R+IL+ G K P +LE
Sbjct: 634 RVILSSGAKSPTVLE 648
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,217
Number of Sequences: 438
Number of extensions: 5837
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52395750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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