Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A09_e353_01.seq
(1506 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P10165 Cluster: Proline-rich proteoglycan 2 precursor; ... 41 0.073
UniRef50_Q58MY0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.13
UniRef50_Q6P0D5 Cluster: WW domain-binding protein 11; n=7; Eute... 40 0.13
UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like ... 38 0.90
UniRef50_A5AN79 Cluster: Putative uncharacterized protein; n=3; ... 37 1.2
UniRef50_P34688 Cluster: Cuticle collagen dpy-7 precursor; n=3; ... 36 2.8
UniRef50_P16252 Cluster: Cuticle collagen 2C; n=3; Rhabditida|Re... 36 2.8
UniRef50_UPI000023E00E Cluster: hypothetical protein FG09687.1; ... 36 3.7
UniRef50_A6GGW9 Cluster: Pkn9 associate protein 1; n=1; Plesiocy... 36 3.7
UniRef50_UPI00006A24AB Cluster: UPI00006A24AB related cluster; n... 35 4.8
UniRef50_Q08YB2 Cluster: Response regulator; n=4; cellular organ... 35 4.8
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian... 35 4.8
UniRef50_A7T073 Cluster: Predicted protein; n=1; Nematostella ve... 35 4.8
UniRef50_Q9Y2W2 Cluster: WW domain-binding protein 11; n=42; Eut... 35 4.8
UniRef50_P34687 Cluster: Cuticle collagen 34; n=38; Chromadorea|... 35 4.8
UniRef50_Q0CQD0 Cluster: Predicted protein; n=1; Aspergillus ter... 35 6.4
UniRef50_P05143 Cluster: Proline-rich protein 2 precursor; n=10;... 35 6.4
UniRef50_UPI00015B5E0C Cluster: PREDICTED: similar to ENSANGP000... 34 8.4
UniRef50_UPI0000F1DAD0 Cluster: PREDICTED: hypothetical protein;... 34 8.4
UniRef50_A7RHP4 Cluster: Predicted protein; n=3; Nematostella ve... 34 8.4
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 34 8.4
>UniRef50_P10165 Cluster: Proline-rich proteoglycan 2 precursor; n=3;
Rattus norvegicus|Rep: Proline-rich proteoglycan 2
precursor - Rattus norvegicus (Rat)
Length = 295
Score = 41.1 bits (92), Expect = 0.073
Identities = 28/87 (32%), Positives = 31/87 (35%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGP 1319
P G PPQ GP PP + P G P P GP + P P P G
Sbjct: 151 PPPGGPQQRPPQ---GP---PPQGGPQRPPQPGSPQGPPPPGGPQQRAPQGPP---PQGG 201
Query: 1318 PGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
P P GPP G + P GP
Sbjct: 202 PQRPPQPGSPQGPPPPGGPQQRPPQGP 228
Score = 38.7 bits (86), Expect = 0.39
Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Frame = -3
Query: 1498 PXRXGXXXXPPQ----KTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXK 1331
P + G PP + P PP + P G P P GP + P P
Sbjct: 173 PPQPGSPQGPPPPGGPQQRAPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPPQGPP--- 229
Query: 1330 PXGPPGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
P G P P GPP G + P GP
Sbjct: 230 PQGGPQRPPQPGSPQGPPPPGGPQQRPPQGP 260
Score = 37.5 bits (83), Expect = 0.90
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGSGXXX 1259
PP + P G P P GP + P P P G P P GPP G
Sbjct: 101 PPAAGPQRPPQPGSPQGPPPPGGPQQRPPQGPP---PQGGPQRPPQPGSPQGPPPPGGPQ 157
Query: 1258 KXPXXGP 1238
+ P GP
Sbjct: 158 QRPPQGP 164
Score = 37.1 bits (82), Expect = 1.2
Identities = 27/87 (31%), Positives = 30/87 (34%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGP 1319
P G PPQ GP PP + P G P P GP + P P P G
Sbjct: 119 PPPGGPQQRPPQ---GP---PPQGGPQRPPQPGSPQGPPPPGGPQQRPPQGPP---PQGG 169
Query: 1318 PGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
P P GPP G + GP
Sbjct: 170 PQRPPQPGSPQGPPPPGGPQQRAPQGP 196
Score = 34.3 bits (75), Expect = 8.4
Identities = 25/77 (32%), Positives = 27/77 (35%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGP 1319
P G PPQ GP PP + P G P P GP + P P P G
Sbjct: 215 PPPGGPQQRPPQ---GP---PPQGGPQRPPQPGSPQGPPPPGGPQQRPPQGPP---PQGG 265
Query: 1318 PGXXKXPXVXVGPPGSG 1268
P P GPP G
Sbjct: 266 PQRPPQPGNPQGPPQQG 282
>UniRef50_Q58MY0 Cluster: Putative uncharacterized protein; n=1;
Cyanophage P-SSM2|Rep: Putative uncharacterized protein -
Cyanophage P-SSM2
Length = 455
Score = 40.3 bits (90), Expect = 0.13
Identities = 27/80 (33%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXG-PGXKVPIXXPXXKPXG 1322
P G PP T GP + PG GGP P G PG P+ P G
Sbjct: 63 PGPPGPAGGPPGPT-GPAGDDGAPGPQGPPGIGGPTGPQGPAGSPGPTGPVGPSNPGPTG 121
Query: 1321 PPGXX--KXPXVXVGPPGSG 1268
P G P GPPG G
Sbjct: 122 PTGPTGPTGPDGPTGPPGPG 141
>UniRef50_Q6P0D5 Cluster: WW domain-binding protein 11; n=7;
Euteleostomi|Rep: WW domain-binding protein 11 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 640
Score = 40.3 bits (90), Expect = 0.13
Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGX-GGPNXPXXTXGPGXKV-PIXXPXXKPX 1325
P G PP + GP PP P P P GP ++ P P +P
Sbjct: 375 PPPLGPPPAPPMRPPGPPSGPPPGPPPGAPPFLRPPGLPSALRGPMPRLLPPGPPPGRPP 434
Query: 1324 GPPGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
GPP P + GPP G + P P
Sbjct: 435 GPP-PGPPPGLPPGPPPRGPPPRLPPPAP 462
>UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like 1 (S.
cerevisiae); n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to FIP1 like 1 (S. cerevisiae) -
Strongylocentrotus purpuratus
Length = 841
Score = 37.5 bits (83), Expect = 0.90
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Frame = -3
Query: 1471 PPQKTXGPV--LXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXP 1298
PP GP L PP P G N P + GP P P G G P
Sbjct: 429 PPPNMGGPPSNLPPPNFSGPPRPMFGDGNYPPQSGGPPMSGPPMSGPPPPMGMHGGPPPP 488
Query: 1297 XVXVGPPGSGXXXKXPXXGP 1238
+ P G G + P GP
Sbjct: 489 NMGPPPMGMGRGPRPPMGGP 508
>UniRef50_A5AN79 Cluster: Putative uncharacterized protein; n=3; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 704
Score = 37.1 bits (82), Expect = 1.2
Identities = 23/83 (27%), Positives = 26/83 (31%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGP 1319
P G P + P P G P P T PG + P P P P
Sbjct: 226 PPPTGPPGSEPSXSPPGSAPPTDPPGXAAPPPGSPGAPPPTGPPGSEPPXSSPGSAP--P 283
Query: 1318 PGXXKXPXVXVGPPGSGXXXKXP 1250
PG P G P SG + P
Sbjct: 284 PGLPPSPPXTPGAPSSGPLPRSP 306
>UniRef50_P34688 Cluster: Cuticle collagen dpy-7 precursor; n=3;
Chromadorea|Rep: Cuticle collagen dpy-7 precursor -
Caenorhabditis elegans
Length = 318
Score = 35.9 bits (79), Expect = 2.8
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXK-PXGPPGXXKXPXVXVGPPG 1274
PG GP G G K P P + P GPPG P GPPG
Sbjct: 197 PGIKGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPG 243
>UniRef50_P16252 Cluster: Cuticle collagen 2C; n=3; Rhabditida|Rep:
Cuticle collagen 2C - Haemonchus contortus (Barber pole
worm)
Length = 210
Score = 35.9 bits (79), Expect = 2.8
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 9/96 (9%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXX-EXXPGXGGP-------NXPXXTXGPGXKVPIXX 1343
P G PP + P+ PP + PG GP P PG P
Sbjct: 34 PGIPGNPGRPPVQPCDPIPIPPCKPCPQGRPGPPGPIGPPGEPGTPGNPGAPGNDAPPGP 93
Query: 1342 PXXK-PXGPPGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
P K P GPPG P G PG+ + GP
Sbjct: 94 PGPKGPPGPPGKAGAPGA-AGQPGANAPSEPLVPGP 128
>UniRef50_UPI000023E00E Cluster: hypothetical protein FG09687.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG09687.1
- Gibberella zeae PH-1
Length = 793
Score = 35.5 bits (78), Expect = 3.7
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = -3
Query: 1471 PPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXG-PPGXXKXPX 1295
PP + PP P G P P GPG I P P PPG P
Sbjct: 667 PPSWMPAGQMPPPQQRGPMIPPPGLPGGPGGPGGPGPNRNIHMPHMFPPSFPPGVMPPPE 726
Query: 1294 VXVGPP 1277
GPP
Sbjct: 727 ALGGPP 732
>UniRef50_A6GGW9 Cluster: Pkn9 associate protein 1; n=1; Plesiocystis
pacifica SIR-1|Rep: Pkn9 associate protein 1 -
Plesiocystis pacifica SIR-1
Length = 237
Score = 35.5 bits (78), Expect = 3.7
Identities = 23/77 (29%), Positives = 25/77 (32%)
Frame = -3
Query: 1468 PQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVX 1289
P GP PP P G P PG I P P GPP + P
Sbjct: 134 PGGPPGPPGGPPGIRGPGGPPGGPPGIRGPGGPPGGPPGIRGPGGPPGGPPPNMRGPS-- 191
Query: 1288 VGPPGSGXXXKXPXXGP 1238
GPPG + P P
Sbjct: 192 -GPPGGPPGMRGPGGPP 207
>UniRef50_UPI00006A24AB Cluster: UPI00006A24AB related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A24AB UniRef100 entry -
Xenopus tropicalis
Length = 239
Score = 35.1 bits (77), Expect = 4.8
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Frame = -3
Query: 1486 GXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPG-- 1313
G PP + GP PG G P + GPG P GP G
Sbjct: 31 GANVRPPSISVGPGGNVQPPSISVGPGAGNVQPPYISVGPGGAGANVQPPSISVGPGGAG 90
Query: 1312 -XXKXPXVXVGPPGSGXXXKXP 1250
+ P + VGP G+G + P
Sbjct: 91 ANVQPPSISVGPGGAGANVQPP 112
>UniRef50_Q08YB2 Cluster: Response regulator; n=4; cellular
organisms|Rep: Response regulator - Stigmatella
aurantiaca DW4/3-1
Length = 413
Score = 35.1 bits (77), Expect = 4.8
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = -3
Query: 1471 PPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXV 1292
PP P P PG P P GPG P P PPG + P
Sbjct: 197 PPGPGAPPPGARPPGPGAPPPGMARPPGPGMPPGPGAPPPGARPPGPGAPPPGMARPPGP 256
Query: 1291 XVGPPGS 1271
PPG+
Sbjct: 257 GAPPPGA 263
>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1289
Score = 35.1 bits (77), Expect = 4.8
Identities = 24/86 (27%), Positives = 28/86 (32%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGP 1319
P G PP G PP PG GP P PG + P P P P
Sbjct: 1116 PMHGGAPPPPPPPMRGGAPPPPPP-----PGGRGPGAPPPPPPPGGRAPGPPPPPGPR-P 1169
Query: 1318 PGXXKXPXVXVGPPGSGXXXKXPXXG 1241
PG P +G G+ + G
Sbjct: 1170 PGGGPPPPPMLGARGAAVDPRGAGRG 1195
>UniRef50_A7T073 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 605
Score = 35.1 bits (77), Expect = 4.8
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = -3
Query: 1468 PQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXK-PXGPPGXXKXPXV 1292
PQ T GP + PG GP PG P P + P GPPG P +
Sbjct: 48 PQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGI 107
Query: 1291 XVGPPGSGXXXKXPXXGP 1238
P G GP
Sbjct: 108 AGAPGPRGPPGPMGPPGP 125
Score = 35.1 bits (77), Expect = 4.8
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = -3
Query: 1468 PQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXK-PXGPPGXXKXPXV 1292
PQ T GP + PG GP PG P P + P GPPG P +
Sbjct: 195 PQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGI 254
Query: 1291 XVGPPGSGXXXKXPXXGP 1238
P G GP
Sbjct: 255 AGAPGPRGPPGPMGPPGP 272
>UniRef50_Q9Y2W2 Cluster: WW domain-binding protein 11; n=42;
Euteleostomi|Rep: WW domain-binding protein 11 - Homo
sapiens (Human)
Length = 641
Score = 35.1 bits (77), Expect = 4.8
Identities = 24/88 (27%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLX-PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXG 1322
P G PP + GP PP P P P +P P +P G
Sbjct: 410 PPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPG 469
Query: 1321 PPGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
PP P + GPP G + P P
Sbjct: 470 PP-PGPPPGLPPGPPPRGPPPRLPPPAP 496
>UniRef50_P34687 Cluster: Cuticle collagen 34; n=38; Chromadorea|Rep:
Cuticle collagen 34 - Caenorhabditis elegans
Length = 299
Score = 35.1 bits (77), Expect = 4.8
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Frame = -3
Query: 1498 PXRXGXXXXPPQKTXGPVLXPP-XXXXEXXPGXGGPNXPXXTXG-------PGXKVPIXX 1343
P G PPQ+ P+ PP + PG GP P G PG
Sbjct: 123 PGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGE 182
Query: 1342 PXXK-PXGPPGXXKXPXVXVGPPG 1274
P K P GPPG P G PG
Sbjct: 183 PGPKGPPGPPGAPGAPGTP-GEPG 205
>UniRef50_Q0CQD0 Cluster: Predicted protein; n=1; Aspergillus terreus
NIH2624|Rep: Predicted protein - Aspergillus terreus
(strain NIH 2624)
Length = 313
Score = 34.7 bits (76), Expect = 6.4
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = -3
Query: 1471 PPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXV 1292
PP PV PP P P P GP P+ P P GPP P
Sbjct: 174 PPPAGPPPVAGPPVPPPHPPPAEPAPPPPPAPQGPPAPPPVEGP-PPPKGPPPPPHSPPG 232
Query: 1291 XVGPPGSGXXXKXPXXGP 1238
G K P P
Sbjct: 233 PPPAEGPPPPAKVPPPAP 250
>UniRef50_P05143 Cluster: Proline-rich protein 2 precursor; n=10;
Deuterostomia|Rep: Proline-rich protein 2 precursor - Mus
musculus (Mouse)
Length = 317
Score = 34.7 bits (76), Expect = 6.4
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Frame = -3
Query: 1468 PQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPX-GPPGXXKXPXV 1292
P + P P + P GGP P GP P P +P GPP P
Sbjct: 188 PTQGPPPTGGPQQRYPQSPPPPGGPQ-PRPPQGPP---PPGGPHPRPTQGPPPTGPQPRP 243
Query: 1291 XVGPPGSGXXXKXPXXGP 1238
GPP +G + P GP
Sbjct: 244 TQGPPPTGGPQQRPPQGP 261
>UniRef50_UPI00015B5E0C Cluster: PREDICTED: similar to
ENSANGP00000003404; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000003404 - Nasonia
vitripennis
Length = 708
Score = 34.3 bits (75), Expect = 8.4
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGSGXXXKXPXXGP 1238
PG GGP PG P P P GPP PPG P GP
Sbjct: 352 PGHGGPPQGPPQGPPGGPAPHVNPAFFPQGPPHQHPGQHPGGPPPGPPGPPHGPPHGP 409
>UniRef50_UPI0000F1DAD0 Cluster: PREDICTED: hypothetical protein; n=2;
Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
rerio
Length = 1102
Score = 34.3 bits (75), Expect = 8.4
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Frame = -3
Query: 1471 PPQKTXGPVLXPPXXXXEXXPGXGG---PNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKX 1301
PP G PP G GG P P G G P P P PPG
Sbjct: 583 PPPPLPGAEAPPPPPPPPPPSGSGGAPPPPPPPPPPGGGPPPPPPPPGSGPPPPPGAPPA 642
Query: 1300 PXVXVGP 1280
P GP
Sbjct: 643 PGAETGP 649
>UniRef50_A7RHP4 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 559
Score = 34.3 bits (75), Expect = 8.4
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Frame = -3
Query: 1450 PVLXPPXXXXEXXPGXGGPNXPXXTXGP-GXKVPIXXPXXK-PXGPP---GXXKXPXVXV 1286
P PP PG GP+ P GP G P P P GPP G P +
Sbjct: 104 PPPPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAI 163
Query: 1285 GPPG 1274
GPPG
Sbjct: 164 GPPG 167
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 34.3 bits (75), Expect = 8.4
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 1231 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPG-PEGPPG 1273
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,191,353,518
Number of Sequences: 1657284
Number of extensions: 21797339
Number of successful extensions: 36742
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 31495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35755
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 160101951575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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