Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_A09_e353_01.seq
         (1506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    29   0.35 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   7.5  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 29.1 bits (62), Expect = 0.35
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +1

Query: 148 MIYNNDMYKTRSYVI-YILGITPSSFTITNYLNL*RGKVSYKLLSID-GAK*TFKLNTTY 321
           +IYNN +Y  RSY+  Y  G  P   T TN +      V+Y    ID GA+         
Sbjct: 18  VIYNNLLYACRSYLSPYQHGFVPKKSTTTNLVEF----VTYYTSQIDAGAQVDAIYTDLK 73

Query: 322 SALNTIYKFVFLKTNNTIPTP 384
           SA +++   + L   N +  P
Sbjct: 74  SAFDSLPHAILLAKLNKVRFP 94


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 20/66 (30%), Positives = 21/66 (31%)
 Frame = -3

Query: 1471 PPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXV 1292
            PP     P L  P          G P  P     PG K  +  P   P G PG    P  
Sbjct: 105  PPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPG--PPGYPGDV-GPKG 161

Query: 1291 XVGPPG 1274
              GP G
Sbjct: 162  EPGPKG 167


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 1457 PGXGPXPPPXXXXXLAGXXGS*PP 1386
            P  GP P P     L G  GS PP
Sbjct: 589  PPMGPPPSPLAGGPLGGPAGSRPP 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,275,497
Number of Sequences: 2352
Number of extensions: 24580
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 176375430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)