Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A09_e353_01.seq
(1506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein. 33 2.1
AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B pr... 33 2.1
AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein. 33 2.1
AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like pro... 33 2.1
AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threoni... 33 2.1
AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein. 33 2.1
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 33 2.7
M63473-1|AAA51558.1| 762|Homo sapiens alpha-5 type IV collagen ... 33 2.7
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 2.7
M31115-1|AAA52045.1| 772|Homo sapiens COL4A5 protein. 33 2.7
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 33 2.7
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 33 2.7
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 33 2.7
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 33 3.6
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 33 3.6
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 33 3.6
BC000274-1|AAH00274.1| 385|Homo sapiens single stranded DNA bin... 32 6.3
AY026292-1|AAK20020.1| 363|Homo sapiens single stranded DNA bin... 32 6.3
BC017020-1|AAH17020.1| 361|Homo sapiens single-stranded DNA bin... 31 8.3
AY026275-1|AAK15803.1| 361|Homo sapiens single stranded DNA bin... 31 8.3
AK074537-1|BAC11046.1| 361|Homo sapiens protein ( Homo sapiens ... 31 8.3
>BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein.
Length = 473
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGS 1271
PP P G P P + G P+ P P G PG P G G+
Sbjct: 187 PPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGA 242
>AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B
protein.
Length = 778
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGS 1271
PP P G P P + G P+ P P G PG P G G+
Sbjct: 492 PPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGA 547
>AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein.
Length = 778
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGS 1271
PP P G P P + G P+ P P G PG P G G+
Sbjct: 492 PPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGA 547
>AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like protein
protein.
Length = 778
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGS 1271
PP P G P P + G P+ P P G PG P G G+
Sbjct: 492 PPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGA 547
>AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threonine
protein kinase protein.
Length = 794
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGS 1271
PP P G P P + G P+ P P G PG P G G+
Sbjct: 508 PPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGA 563
>AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein.
Length = 715
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 1438 PPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGS 1271
PP P G P P + G P+ P P G PG P G G+
Sbjct: 429 PPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGA 484
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 1231 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 1273
>M63473-1|AAA51558.1| 762|Homo sapiens alpha-5 type IV collagen
protein.
Length = 762
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 308 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 350
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 1150 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 1192
>M31115-1|AAA52045.1| 772|Homo sapiens COL4A5 protein.
Length = 772
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 318 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 360
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 1231 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 1273
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 1231 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 1273
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -3
Query: 1411 PGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
PG GP P + GP + P P P GPPG P GPPG
Sbjct: 1231 PGVQGPPGPPGSPGPALEGPKGNPG--PQGPPGRPGLPGPE-GPPG 1273
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = -3
Query: 1453 GPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
GP P + PG GP GP ++ + P P GPPG P GPPG
Sbjct: 619 GPQGEPGLQGTQGVPGAPGPPGEA---GPRGELSVSTPVPGPPGPPGPPGHPGPQ-GPPG 674
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = -3
Query: 1453 GPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
GP P + PG GP GP ++ + P P GPPG P GPPG
Sbjct: 619 GPQGEPGLQGTQGVPGAPGPPGEA---GPRGELSVSTPVPGPPGPPGPPGHPGPQ-GPPG 674
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 32.7 bits (71), Expect = 3.6
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = -3
Query: 1453 GPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPG 1274
GP P + PG GP GP ++ + P P GPPG P GPPG
Sbjct: 33 GPQGEPGLQGTQGVPGAPGPPGEA---GPRGELSVSTPVPGPPGPPGPPGHPGPQ-GPPG 88
>BC000274-1|AAH00274.1| 385|Homo sapiens single stranded DNA binding
protein 4 protein.
Length = 385
Score = 31.9 bits (69), Expect = 6.3
Identities = 21/73 (28%), Positives = 23/73 (31%)
Frame = -3
Query: 1486 GXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXX 1307
G PQ G + PP GP P GPG + P P P
Sbjct: 205 GMASVGPQSYGGGMRPPPNSLA-------GPGLPAMNMGPGVRGPWASPSGNSI--PYSS 255
Query: 1306 KXPXVXVGPPGSG 1268
P GPPG G
Sbjct: 256 SSPGSYTGPPGGG 268
>AY026292-1|AAK20020.1| 363|Homo sapiens single stranded DNA binding
protein-4 protein.
Length = 363
Score = 31.9 bits (69), Expect = 6.3
Identities = 21/73 (28%), Positives = 23/73 (31%)
Frame = -3
Query: 1486 GXXXXPPQKTXGPVLXPPXXXXEXXPGXGGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXX 1307
G PQ G + PP GP P GPG + P P P
Sbjct: 183 GMASVGPQSYGGGMRPPPNSLA-------GPGLPAMNMGPGVRGPWASPSGNSI--PYSS 233
Query: 1306 KXPXVXVGPPGSG 1268
P GPPG G
Sbjct: 234 SSPGSYTGPPGGG 246
>BC017020-1|AAH17020.1| 361|Homo sapiens single-stranded DNA binding
protein 2 protein.
Length = 361
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 1402 GGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGSG 1268
GGP P GPG P P P P VGPPG G
Sbjct: 204 GGPGMPGMNMGPGGGRPWPNP-TNANSIPYSSASPGNYVGPPGGG 247
>AY026275-1|AAK15803.1| 361|Homo sapiens single stranded DNA binding
protein-2 protein.
Length = 361
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 1402 GGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGSG 1268
GGP P GPG P P P P VGPPG G
Sbjct: 204 GGPGMPGMNMGPGGGRPWPNP-TNANSIPYSSASPGNYVGPPGGG 247
>AK074537-1|BAC11046.1| 361|Homo sapiens protein ( Homo sapiens cDNA
FLJ90056 fis, clone HEMBA1003072, weakly similar to
Gallus gallus single-strand DNA-binding protein csdp
mRNA. ).
Length = 361
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 1402 GGPNXPXXTXGPGXKVPIXXPXXKPXGPPGXXKXPXVXVGPPGSG 1268
GGP P GPG P P P P VGPPG G
Sbjct: 204 GGPGMPGMNMGPGGGRPWPNP-TNANSIPYSSASPGNYVGPPGGG 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,809,513
Number of Sequences: 237096
Number of extensions: 3618241
Number of successful extensions: 9672
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9615
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22362126672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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