BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030723E4_A06_e329_02.seq (1516 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 32 1.0 01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 31 3.2 07_03_0993 - 23182070-23182615 30 4.2 09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 30 5.5 >11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774, 6011867-6011964,6013238-6013608 Length = 374 Score = 32.3 bits (70), Expect = 1.0 Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 6/75 (8%) Frame = +1 Query: 589 DIKPIGKPVASIPIRGPPRA--YGPPKPMLYXXXXXXXXXXXXGYGGNGRPGFSDKYGVS 762 D +P G P A PP Y P P Y GYGGN R G YG Sbjct: 292 DFRP-GGPSAPGTYGQPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQGPGPAYGGD 350 Query: 763 N----SNYQFSQSGG 795 N SN SQS G Sbjct: 351 NWQGGSNQYPSQSEG 365 >01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 Length = 580 Score = 30.7 bits (66), Expect = 3.2 Identities = 22/75 (29%), Positives = 28/75 (37%) Frame = +1 Query: 607 KPVASIPIRGPPRAYGPPKPMLYXXXXXXXXXXXXGYGGNGRPGFSDKYGVSNSNYQFSQ 786 +P P GPP +YG Y GY G+ P G+ +S F+ Sbjct: 430 EPPVGRPNSGPPPSYGAGG---YGPQGGSGFSESYGYSGS--PSHRGNAGMKSSPSPFAP 484 Query: 787 SGGIYGGEVNYXTKP 831 SG GG NY P Sbjct: 485 SGPSSGGSGNYGRLP 499 >07_03_0993 - 23182070-23182615 Length = 181 Score = 30.3 bits (65), Expect = 4.2 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +1 Query: 343 DDIVDELVSRKQGRSLGGFDNFDEVYSDPTIKEALDGGDDPEARNLIIGRLCTLGL 510 DD VD+ V+ S G DN +EV +++ GG D + ++G LC++GL Sbjct: 65 DDEVDDAVANASEGS-GDADNDEEVEM-VLVEDEQGGGGDHRWQQHVVGVLCSVGL 118 >09_06_0172 + 21329904-21331512,21331595-21331740,21332333-21332556, 21333689-21334448 Length = 912 Score = 29.9 bits (64), Expect = 5.5 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 6/84 (7%) Frame = +1 Query: 574 YAQPVDIKPIGKPVASIPIRGPPRAYG----PPKPMLYXXXXXXXXXXXXGYGGNGRPGF 741 + +P ++ PVA P GPP YG PP P GYG P + Sbjct: 146 HRRPEIVRSAAPPVAPPPQMGPPPPYGSGYAPPPP----------YGSGYGYGYGPAPDY 195 Query: 742 SDKYGVSNSNYQ--FSQSGGIYGG 807 V+N Y + GG GG Sbjct: 196 GGGMAVANGGYDPGYGGMGGASGG 219 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 33,980,078 Number of Sequences: 37544 Number of extensions: 643949 Number of successful extensions: 1448 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1320 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1443 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 4861283252 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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