Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_A06_e329_02.seq
         (1516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    28   0.81 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   3.3  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
            protein.
          Length = 993

 Score = 27.9 bits (59), Expect = 0.81
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 788  VAEFTEVKLTMXLNLQVMPTKDHTVTIFLNQT-TPKYHLF 904
            +A  + V+L   L L +MP K H   +F+ +  T K HLF
Sbjct: 882  IASMSGVQLFERLRLFLMPVKHHPQVLFVRRVRTWKMHLF 921


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 484  IGRLCTLGLIQCDDEETQEKRTYVSPDDLIYAQPVDIKPIGKPVASIPIRGPPR 645
            +G+ C L L+ C   E QE       +  + A  + ++   K     P++G P+
Sbjct: 1825 LGKYCDLDLVHCAQMEMQEALDMTQEEMDLAAHELMLEERFKRKNCAPLKGQPK 1878


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,203,825
Number of Sequences: 2352
Number of extensions: 21756
Number of successful extensions: 38
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177594615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)