BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030723E4_A04_e313_02.seq (1509 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5 AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5 AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5 AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5 AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 2.6 AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 2.6 AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 2.6 AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 2.6 AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 2.6 AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 2.6 AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 2.6 AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 2.6 AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 24 3.4 >AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase variant 2 protein. Length = 1558 Score = 25.0 bits (52), Expect = 1.5 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = +3 Query: 570 RMKPGKPSTFATCQFEGKTKYIFALPGNPVSAYVCCLLF 686 ++KP K + F + ++I LP A++ CL+F Sbjct: 99 QLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLIF 137 >AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase variant 1 protein. Length = 1558 Score = 25.0 bits (52), Expect = 1.5 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = +3 Query: 570 RMKPGKPSTFATCQFEGKTKYIFALPGNPVSAYVCCLLF 686 ++KP K + F + ++I LP A++ CL+F Sbjct: 99 QLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLIF 137 >AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B protein. Length = 1558 Score = 25.0 bits (52), Expect = 1.5 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = +3 Query: 570 RMKPGKPSTFATCQFEGKTKYIFALPGNPVSAYVCCLLF 686 ++KP K + F + ++I LP A++ CL+F Sbjct: 99 QLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLIF 137 >AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A protein. Length = 1558 Score = 25.0 bits (52), Expect = 1.5 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = +3 Query: 570 RMKPGKPSTFATCQFEGKTKYIFALPGNPVSAYVCCLLF 686 ++KP K + F + ++I LP A++ CL+F Sbjct: 99 QLKPDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLIF 137 >AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTS 177 >AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177 >AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax protein. Length = 230 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177 >AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax protein. Length = 312 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177 >AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax protein. Length = 297 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177 >AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax protein. Length = 268 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 96 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 133 >AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. Length = 312 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177 >AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr protein. Length = 312 Score = 24.2 bits (50), Expect = 2.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 529 STGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVS 416 S+G S +PP + +TS + ++ PA+S+S S Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTS 177 >AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax protein. Length = 314 Score = 23.8 bits (49), Expect = 3.4 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 955 VXTDPAXSCGVXSVRPGNSKSTLAPHALRS 866 V DPA S G + R GNS S P ++ S Sbjct: 158 VGGDPASSPGAAAGRTGNSLSWNNPCSINS 187 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 243,674 Number of Sequences: 336 Number of extensions: 5090 Number of successful extensions: 20 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 122,585 effective HSP length: 60 effective length of database: 102,425 effective search space used: 45271850 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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