Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A04_e313_02.seq
(1509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49889-6|CAA90069.2| 435|Caenorhabditis elegans Hypothetical pr... 180 3e-45
Z49887-7|CAA90060.2| 435|Caenorhabditis elegans Hypothetical pr... 180 3e-45
Z78016-3|CAB01440.2| 391|Caenorhabditis elegans Hypothetical pr... 67 4e-11
AF042070-1|AAB97842.1| 391|Caenorhabditis elegans LIN-46 protein. 67 4e-11
AF042069-1|AAB97841.1| 391|Caenorhabditis elegans LIN-46 protein. 67 4e-11
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 2.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 2.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 2.8
>Z49889-6|CAA90069.2| 435|Caenorhabditis elegans Hypothetical protein
T06H11.4 protein.
Length = 435
Score = 180 bits (437), Expect = 3e-45
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 7/305 (2%)
Frame = +3
Query: 78 EDKQTELEVEILI--APQLGQDVRPVGFDIPMGTILVNKGEILDAAKIGVLAGAGYRSIT 251
+D+Q+E E EI+ A Q+G+++R G D+ ++V + +A+ G+L G R+I
Sbjct: 128 QDQQSE-ETEIICKQAVQVGENIRLPGSDVRSSDVIVPFEAQIGSAEFGILNAFGIRTIK 186
Query: 252 AQVNPKVALMSTGNELQEPSEVKLRPAHIRDSNRTMLKALLREHGYDSIDCGIARDTPEE 431
P V ++STG+EL P + +RDSN L AL +EHG++ ID G D E
Sbjct: 187 VYKKPVVTVISTGSELVSPMVENVPLGMVRDSNAPQLVALFKEHGFNVIDGGRVVDDKEG 246
Query: 432 LVAGIATALSRADVLVCTGGVSMGERDLLKPVLLNDFGANLYYGRVRMKPGKPSTFATCQ 611
L + L +DV+V TGGVSMGE+D +K LL+ G + +GRV MKPG P T AT +
Sbjct: 247 LDKKLTECLEHSDVIVTTGGVSMGEQDYMKNALLH-LGFKIEFGRVSMKPGLPCTVATRE 305
Query: 612 --FEGKTKYIFALPGNPVSAYVCCLLFVIRGLRVCNG-REGAWPRLRVRLSHAVALDPRP 782
E K K + ALPGNP SA+VC LF + +R +G R ++ VR++ + L RP
Sbjct: 306 SASERKLKVVLALPGNPASAWVCSHLFAVPLIRDMSGYRRINHTKINVRIAQDIKLGDRP 365
Query: 783 EYARAEI-HLSDTDE-LPTXKLIGNQCSSRLLSACGASVLLELPGRTXSTPQLXAGSVXT 956
E+ RA I + D D+ P + NQ SS + + GA VLLEL + + +
Sbjct: 366 EFVRAFIEQVGDEDDGHPIAHVTKNQISSNIGNLVGAQVLLELNAASADKTVVPKNGLVK 425
Query: 957 ALLXS 971
AL+ S
Sbjct: 426 ALILS 430
>Z49887-7|CAA90060.2| 435|Caenorhabditis elegans Hypothetical protein
T06H11.4 protein.
Length = 435
Score = 180 bits (437), Expect = 3e-45
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 7/305 (2%)
Frame = +3
Query: 78 EDKQTELEVEILI--APQLGQDVRPVGFDIPMGTILVNKGEILDAAKIGVLAGAGYRSIT 251
+D+Q+E E EI+ A Q+G+++R G D+ ++V + +A+ G+L G R+I
Sbjct: 128 QDQQSE-ETEIICKQAVQVGENIRLPGSDVRSSDVIVPFEAQIGSAEFGILNAFGIRTIK 186
Query: 252 AQVNPKVALMSTGNELQEPSEVKLRPAHIRDSNRTMLKALLREHGYDSIDCGIARDTPEE 431
P V ++STG+EL P + +RDSN L AL +EHG++ ID G D E
Sbjct: 187 VYKKPVVTVISTGSELVSPMVENVPLGMVRDSNAPQLVALFKEHGFNVIDGGRVVDDKEG 246
Query: 432 LVAGIATALSRADVLVCTGGVSMGERDLLKPVLLNDFGANLYYGRVRMKPGKPSTFATCQ 611
L + L +DV+V TGGVSMGE+D +K LL+ G + +GRV MKPG P T AT +
Sbjct: 247 LDKKLTECLEHSDVIVTTGGVSMGEQDYMKNALLH-LGFKIEFGRVSMKPGLPCTVATRE 305
Query: 612 --FEGKTKYIFALPGNPVSAYVCCLLFVIRGLRVCNG-REGAWPRLRVRLSHAVALDPRP 782
E K K + ALPGNP SA+VC LF + +R +G R ++ VR++ + L RP
Sbjct: 306 SASERKLKVVLALPGNPASAWVCSHLFAVPLIRDMSGYRRINHTKINVRIAQDIKLGDRP 365
Query: 783 EYARAEI-HLSDTDE-LPTXKLIGNQCSSRLLSACGASVLLELPGRTXSTPQLXAGSVXT 956
E+ RA I + D D+ P + NQ SS + + GA VLLEL + + +
Sbjct: 366 EFVRAFIEQVGDEDDGHPIAHVTKNQISSNIGNLVGAQVLLELNAASADKTVVPKNGLVK 425
Query: 957 ALLXS 971
AL+ S
Sbjct: 426 ALILS 430
>Z78016-3|CAB01440.2| 391|Caenorhabditis elegans Hypothetical
protein R186.4 protein.
Length = 391
Score = 66.9 bits (156), Expect = 4e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Frame = +3
Query: 102 VEILIAPQLGQDVRPVGFDIPMGTILVNKGEILDAAKIGVLAGAGYRSITAQVNPKVALM 281
+E+L P+ G ++R VG + G IL+ G LD I +L G + P+V ++
Sbjct: 128 IEVLRKPKEGDNIREVGSEAKTGEILLKDGHHLDTMSITLLHALGISQVEIYKKPRVCVL 187
Query: 282 STGNELQEPSEVKLRPAHIRDSNRTMLKALLREHGYDSIDCGIARDTPEELVAGIATALS 461
S G++L K+ + NR+ L L + G+ +ID G + + E+ I TA S
Sbjct: 188 SIGSDLNSN---KMYGSF----NRSQLLELFQSQGFTAIDAGSSTEHITEVEEKIRTAAS 240
Query: 462 RADVLVCTGGVSMGERDLLKPVLLNDFGANLYYGRVRMKPGKPSTFATCQFEGKTKYIFA 641
A VLV GG + R++ K + V PG T +T + + +
Sbjct: 241 FACVLVTVGGAQV-IREVAKTLKF-----KFEIQDVDSTPGN-FTVSTGKIDETPVVLSI 293
Query: 642 LPGNPVSAYVCCLLFVIRGLRVCNGREGAWP-RLRVRLSHAVALDPRPEYARAEIHLSDT 818
P VS+++ LFV LR G+ R + L+ ++ + RA +S
Sbjct: 294 FPEYHVSSWIGANLFVSPILRAMEGQNSETSHRFKAELTQPISKTSETRFLRARSEVSKG 353
Query: 819 DELPT 833
+ + T
Sbjct: 354 NLIST 358
>AF042070-1|AAB97842.1| 391|Caenorhabditis elegans LIN-46 protein.
Length = 391
Score = 66.9 bits (156), Expect = 4e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Frame = +3
Query: 102 VEILIAPQLGQDVRPVGFDIPMGTILVNKGEILDAAKIGVLAGAGYRSITAQVNPKVALM 281
+E+L P+ G ++R VG + G IL+ G LD I +L G + P+V ++
Sbjct: 128 IEVLRKPKEGDNIREVGSEAKTGEILLKDGHHLDTMSITLLHALGISQVEIYKKPRVCVL 187
Query: 282 STGNELQEPSEVKLRPAHIRDSNRTMLKALLREHGYDSIDCGIARDTPEELVAGIATALS 461
S G++L K+ + NR+ L L + G+ +ID G + + E+ I TA S
Sbjct: 188 SIGSDLNSN---KMYGSF----NRSQLLELFQSQGFTAIDAGSSTEHITEVEEKIRTAAS 240
Query: 462 RADVLVCTGGVSMGERDLLKPVLLNDFGANLYYGRVRMKPGKPSTFATCQFEGKTKYIFA 641
A VLV GG + R++ K + V PG T +T + + +
Sbjct: 241 FACVLVTVGGAQV-IREVAKTLKF-----KFEIQDVDSTPGN-FTVSTGKIDETPVVLSI 293
Query: 642 LPGNPVSAYVCCLLFVIRGLRVCNGREGAWP-RLRVRLSHAVALDPRPEYARAEIHLSDT 818
P VS+++ LFV LR G+ R + L+ ++ + RA +S
Sbjct: 294 FPEYHVSSWIGANLFVSPILRAMEGQNSETSHRFKAELTQPISKTSETRFLRARSEVSKG 353
Query: 819 DELPT 833
+ + T
Sbjct: 354 NLIST 358
>AF042069-1|AAB97841.1| 391|Caenorhabditis elegans LIN-46 protein.
Length = 391
Score = 66.9 bits (156), Expect = 4e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Frame = +3
Query: 102 VEILIAPQLGQDVRPVGFDIPMGTILVNKGEILDAAKIGVLAGAGYRSITAQVNPKVALM 281
+E+L P+ G ++R VG + G IL+ G LD I +L G + P+V ++
Sbjct: 128 IEVLRKPKEGDNIREVGSEAKTGEILLKDGHHLDTMSITLLHALGISQVEIYKKPRVCVL 187
Query: 282 STGNELQEPSEVKLRPAHIRDSNRTMLKALLREHGYDSIDCGIARDTPEELVAGIATALS 461
S G++L K+ + NR+ L L + G+ +ID G + + E+ I TA S
Sbjct: 188 SIGSDLNSN---KMYGSF----NRSQLLELFQSQGFTAIDAGSSTEHITEVEEKIRTAAS 240
Query: 462 RADVLVCTGGVSMGERDLLKPVLLNDFGANLYYGRVRMKPGKPSTFATCQFEGKTKYIFA 641
A VLV GG + R++ K + V PG T +T + + +
Sbjct: 241 FACVLVTVGGAQV-IREVAKTLKF-----KFEIQDVDSTPGN-FTVSTGKIDETPVVLSI 293
Query: 642 LPGNPVSAYVCCLLFVIRGLRVCNGREGAWP-RLRVRLSHAVALDPRPEYARAEIHLSDT 818
P VS+++ LFV LR G+ R + L+ ++ + RA +S
Sbjct: 294 FPEYHVSSWIGANLFVSPILRAMEGQNSETSHRFKAELTQPISKTSETRFLRARSEVSKG 353
Query: 819 DELPT 833
+ + T
Sbjct: 354 NLIST 358
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 2.1
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Frame = -3
Query: 556 YKFAPKSLSSTGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVSRAIPQSILS*PCS 377
+ F P + G RS + T PV T+T I ++++ + +S+ S S
Sbjct: 349 FTFPPTPTAMPGVTRSPA-CKTTPVLTTTIPFKTCTMIAVSTTTPMISLTTESMQSTTSS 407
Query: 376 --LSKAFNIVLFESRICAGRNLTSDGS*SSLPVDISATLGLT*AVMDR*PAPANTPILAA 203
+S + + + ++TSD S S+ P+D+S++ + P+ A++ +A
Sbjct: 408 SEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTESQSSTPSDASSS-ESA 466
Query: 202 SSISPLLTSIVPMGISKPTGRTS*PNCGAIRISTSNSVCLSSASCRIXCSPGDXTSX*SG 23
SS SP T+ G S +S + ++S SS+S + P ++ SG
Sbjct: 467 SSSSPAATT-EESGSSTDAVSSSPSGSSSESPNSSTGGSDSSSSESVTTEPSGSSTEPSG 525
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 2.1
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Frame = -3
Query: 556 YKFAPKSLSSTGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVSRAIPQSILS*PCS 377
+ F P + G RS + T PV T+T I ++++ + +S+ S S
Sbjct: 349 FTFPPTPTAMPGVTRSPA-CKTTPVLTTTIPFKTCTMIAVSTTTPMISLTTESMQSTTSS 407
Query: 376 --LSKAFNIVLFESRICAGRNLTSDGS*SSLPVDISATLGLT*AVMDR*PAPANTPILAA 203
+S + + + ++TSD S S+ P+D+S++ + P+ A++ +A
Sbjct: 408 SEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTESQSSTPSDASSS-ESA 466
Query: 202 SSISPLLTSIVPMGISKPTGRTS*PNCGAIRISTSNSVCLSSASCRIXCSPGDXTSX*SG 23
SS SP T+ G S +S + ++S SS+S + P ++ SG
Sbjct: 467 SSSSPAATT-EESGSSTDAVSSSPSGSSSESPNSSTGGSDSSSSESVTTEPSGSSTEPSG 525
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 2.1
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Frame = -3
Query: 556 YKFAPKSLSSTGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVSRAIPQSILS*PCS 377
+ F P + G RS + T PV T+T I ++++ + +S+ S S
Sbjct: 349 FTFPPTPTAMPGVTRSPA-CKTTPVLTTTIPFKTCTMIAVSTTTPMISLTTESMQSTTSS 407
Query: 376 --LSKAFNIVLFESRICAGRNLTSDGS*SSLPVDISATLGLT*AVMDR*PAPANTPILAA 203
+S + + + ++TSD S S+ P+D+S++ + P+ A++ +A
Sbjct: 408 SEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTESQSSTPSDASSS-ESA 466
Query: 202 SSISPLLTSIVPMGISKPTGRTS*PNCGAIRISTSNSVCLSSASCRIXCSPGDXTSX*SG 23
SS SP T+ G S +S + ++S SS+S + P ++ SG
Sbjct: 467 SSSSPAATT-EESGSSTDAVSSSPSGSSSESPNSSTGGSDSSSSESVTTEPSGSSTEPSG 525
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 2.1
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Frame = -3
Query: 556 YKFAPKSLSSTGFKRSRSPIDTPPVQTSTSARDKAVAIPATSSSGVSRAIPQSILS*PCS 377
+ F P + G RS + T PV T+T I ++++ + +S+ S S
Sbjct: 349 FTFPPTPTAMPGVTRSPA-CKTTPVLTTTIPFKTCTMIAVSTTTPMISLTTESMQSTTSS 407
Query: 376 --LSKAFNIVLFESRICAGRNLTSDGS*SSLPVDISATLGLT*AVMDR*PAPANTPILAA 203
+S + + + ++TSD S S+ P+D+S++ + P+ A++ +A
Sbjct: 408 SEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTESQSSTPSDASSS-ESA 466
Query: 202 SSISPLLTSIVPMGISKPTGRTS*PNCGAIRISTSNSVCLSSASCRIXCSPGDXTSX*SG 23
SS SP T+ G S +S + ++S SS+S + P ++ SG
Sbjct: 467 SSSSPAATT-EESGSSTDAVSSSPSGSSSESPNSSTGGSDSSSSESVTTEPSGSSTEPSG 525
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 30.7 bits (66), Expect = 2.8
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Frame = -3
Query: 565 RP*YKFAPKSLSSTGFKRSRSPIDTPPVQTSTSARDKAVA--IPATSSSGVSRAIPQSIL 392
RP P ++S++ S SPI + QTS+SA + P+ +++ ++ I S
Sbjct: 344 RPTSTGIPSTVSTSQGTSSTSPIPST-TQTSSSAPSTYTSNFTPSPTTTLLTSTIAPSTQ 402
Query: 391 S*PCSLSKAFNIVLFESRICAGRNLTSDGS*SSLPVDISATLG---LT*AVMDR*PAPAN 221
P S + + I G ++ GS SS V + T ++ + + P P +
Sbjct: 403 GVPTSSKSSSPNSTPTTTITPGAPSSTLGSSSSTIVSTTITPSTPKVSTLTLSQSPTPTS 462
Query: 220 TPILAAS----SISPLLTS-IVPMGISKPTGRTS*PNCGAIRISTSNSVCLSSAS 71
TP++ +S S S ++TS I P PT ++ P +T S +S S
Sbjct: 463 TPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPS 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,929,606
Number of Sequences: 27780
Number of extensions: 488289
Number of successful extensions: 1452
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4349991404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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