Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_A04_e313_02.seq
         (1509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   5.2  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   5.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   9.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   9.1  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 444 YPPLVLQECHVLYRNRYYRSRV 379
           YPPLV    H+L+R+   R  V
Sbjct: 139 YPPLVSGALHLLFRHFSQRQEV 160


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 444 YPPLVLQECHVLYRNRYYRSRV 379
           YPPLV    H+L+R+   R  V
Sbjct: 107 YPPLVSGALHLLFRHFSQRQEV 128


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 471 HRPETKRSQYPPLVLQECHVLYRN 400
           HRP+TK  + PP+     H+ + +
Sbjct: 148 HRPDTKLMKLPPMYEVMPHLYFND 171


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 471 HRPETKRSQYPPLVLQECHVLYRN 400
           HRP+TK  + PP+     H+ + +
Sbjct: 148 HRPDTKLMKLPPMYEVMPHLYFND 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,261
Number of Sequences: 438
Number of extensions: 6208
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52754625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)