Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A03_e305_01.seq
(1481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 62 1e-10
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 43 9e-05
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 43 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 2e-04
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 41 4e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 41 4e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 37 0.006
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 33 0.13
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 32 0.23
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 31 0.41
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 30 0.94
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 29 2.2
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 2.2
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 29 2.2
SPAC9.13c |cwf16|SPAPJ735.01c|splicing factor |Schizosaccharomyc... 29 2.2
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 28 2.9
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 28 3.8
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 27 5.0
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 27 5.0
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 27 6.6
SPAC22F8.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 8.7
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 8.7
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 8.7
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 27 8.7
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 62.5 bits (145), Expect = 1e-10
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 5/194 (2%)
Frame = +3
Query: 75 KIVHNNDTWSKCDY--CDKQFKSKRNIRRHIEYTHLGMKRYKCI--ECETLFKEKRSLRK 242
K H N C Y CD QF +++++ RHIE H K Y C C+ F + + LR
Sbjct: 74 KRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE-VHRKPKPYACTWEGCDECFSKHQQLRS 132
Query: 243 HVRTKHPNSVLFP-ECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALT 419
H+ H + + +P C RF + + + H+ H + ++ C +
Sbjct: 133 HISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHE-KIISYSCPHESCVGHEGFEKW 191
Query: 420 IHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQCHVNLLPNIKQKVLPRCILCMKDFS 599
LQ H+ E + C C FK + +H+ H L K P C K F+
Sbjct: 192 SQLQ-NHIREAHVPSCSICGRQFKTAAHL-RHHVVLHQTTLEERKTYHCP-MEGCKKSFT 248
Query: 600 TRKTLKRHIKKFHD 641
LK+HI H+
Sbjct: 249 RSSALKKHISVIHE 262
Score = 48.0 bits (109), Expect = 3e-06
Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 5/212 (2%)
Frame = +3
Query: 201 ECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCG 380
EC + L +H+RT + C K F KIH K H+ N+ C
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHT-NVKPFSCH 86
Query: 381 L--CTISFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQCHVNLLPNIK 554
C F + + L H++ + E C+ F + H CH +LLP
Sbjct: 87 YDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLP--- 143
Query: 555 QKVLPRCIL--CMKDFSTRKTLKRHIKKFHDCFEVDELANFGSRRRIFNVECDQCMKNFN 728
P C C F+T++ L+ H+ + H+ +I + C ++
Sbjct: 144 ---YP-CTYQDCELRFATKQKLQNHVNRAHE--------------KIISYSCPH--ESCV 183
Query: 729 GDLHYNKYIK-QKHLRDSIIFKCETCGSSYNS 821
G + K+ + Q H+R++ + C CG + +
Sbjct: 184 GHEGFEKWSQLQNHIREAHVPSCSICGRQFKT 215
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHI---EYTHLGMKRYKC-IE-CETLFKEKRSLRKHVRTKHPNSV 272
C C +QFK+ ++R H+ + T K Y C +E C+ F +L+KH+ H ++
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 273 LFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQ 431
F C C +F + HL+ + C I E + IH Q
Sbjct: 266 AF-HCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEGVAIHDQ 317
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +3
Query: 60 IRHEVKIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLR 239
+ H+ + + C K F +++HI H G + C C T F K L+
Sbjct: 224 VLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQ 283
Query: 240 KHVR---TKHPNSVLFPECHICHKRFE 311
+H+ K + EC I H E
Sbjct: 284 RHLERGTCKKAHKPYINECGIKHDGIE 310
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 43.2 bits (97), Expect = 9e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKHPNS 269
C C K+FK ++RRHI H K + CI C F + +LR+H R H N+
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERL-HVNA 476
Score = 39.9 bits (89), Expect = 9e-04
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 177 GMKRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKL 344
G K + C EC FK LR+H+R+ H + F C IC KRF + + H +L
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPF-VC-ICGKRFSRRDNLRQHERL 472
Score = 26.6 bits (56), Expect = 8.7
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Frame = +3
Query: 351 SFNMNTHPCGLCTISFSSNEALTIHLQ---TKHLAEDEIYKCEECNLV-----FKGQENF 506
S + N P T S++S E ++ +L T + + + E+ + K ++
Sbjct: 346 STSYNDTPQQSVTGSYNSGETMSTYLNQTNTSGRSPNSMEATEQIGTIGTDGSMKRRKRR 405
Query: 507 EQHNEQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFH 638
+ N + V P K V P C K F + L+RHI+ H
Sbjct: 406 QPSNRKTSVPRSPGGKSFVCPEC---SKKFKRSEHLRRHIRSLH 446
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 84 HNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTK 257
H N +C C K F + + RRH E H G+K + C+ C F +L +H +++
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNRHYKSE 650
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Frame = +3
Query: 9 PRWRPL*XLVXSPGLQXIRHEVKIVHNNDTWSKCDY--CDKQFKSKRNIRRHIEYTHLGM 182
PR R L LV + + K + C + C+K+F N++ H+ TH
Sbjct: 539 PRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMN-THTNY 597
Query: 183 KRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLK 341
+ ++C C+ F + R+H + H F C C++RF + H K
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQL-HTGIKAF-ACVTCNQRFARMDALNRHYK 648
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 105 KCDY--CDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKH 260
KCD+ C K F K + RRH +H K + C C + F L +HV KH
Sbjct: 18 KCDFQGCTKSFTRKEHARRHFR-SHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 108 CDY--CDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKH 260
C Y C K F K ++RRH E TH +K + C C F L +HV+ H
Sbjct: 28 CTYPDCPKSFTRKEHLRRH-ERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 63 RHEVKIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHL 176
RHE H N C +C++ F + RH++ HL
Sbjct: 45 RHER--THENVKAFSCSFCNRAFARSDVLNRHVQQMHL 80
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 384 CTISFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQCHV 533
C SF+ E L H +T + + C CN F + +H +Q H+
Sbjct: 33 CPKSFTRKEHLRRHERTHENVK--AFSCSFCNRAFARSDVLNRHVQQMHL 80
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +3
Query: 117 CDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPECHIC 296
C+K+ K N+ HI+ THL + Y+C C+ F L++H+R H N P C
Sbjct: 450 CNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFVRHHDLKRHLRI-HENG--RPYVCEC 505
Query: 297 HKRFESAKSCKIH 335
KRF + H
Sbjct: 506 LKRFNRLDALNRH 518
Score = 30.7 bits (66), Expect = 0.54
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 84 HNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKH 245
H +D +CD C F +++RH+ H + Y C EC F +L +H
Sbjct: 467 HLSDRPYRCDLCKAGFVRHHDLKRHLR-IHENGRPYVC-ECLKRFNRLDALNRH 518
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPE 284
CD C K+F N+ RH + H + C CE K K L++H++ H + + E
Sbjct: 33 CDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIEE 90
Score = 34.3 bits (75), Expect = 0.044
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 456 IYKCEECNLVFKGQENFEQHNEQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKF 635
++ C++C F EN +H + CH P +P C C + LKRHI++F
Sbjct: 30 VFPCDQCAKRFTRHENLTRH-KACHSKAEP------IP-CPYCEIKCKRKDLLKRHIQRF 81
Query: 636 HD 641
H+
Sbjct: 82 HN 83
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 273 LFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKH 440
+FP C C KRF ++ H K HS PC C I + L H+Q H
Sbjct: 30 VFP-CDQCAKRFTRHENLTRH-KACHS-KAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 459 YKCEECNLVFKGQENFEQHNEQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFH 638
Y CE C F E+ ++H H N P ++ C + FS R L RH +K H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 31.9 bits (69), Expect = 0.23
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = +3
Query: 336 LKLLHSFNMNTHPC-GLCTISFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQ 512
+ +L S +++T G +F+S L + + KH+ E + EC L G F
Sbjct: 111 IPVLESVHLHTKLIDGRPITNFASFNFLDL-AENKHITECAVATLRECGLGACGPPGFYG 169
Query: 513 HNEQCHVNLLPNIKQKV-LPRCILCMKDFSTRKTLKRHIKKFHDCFEVDELANFGSRRRI 689
++ H+ L +I + + R I+ + F T ++ K D VDE NF ++ I
Sbjct: 170 TQDK-HLRLEKDIASFIGVERAIVYAQSFQTISSVIPAFSKRGDILVVDEACNFAIQKGI 228
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 31.1 bits (67), Expect = 0.41
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 99 WSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCI--ECETLFKEKRSLRKHVRTKHPNSV 272
W C S+ + H+ +H G K + C EC+ F +L KH+RT H
Sbjct: 77 WDDCPRKGMVQTSRFALVAHLR-SHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADT 135
Query: 273 LFP 281
L P
Sbjct: 136 LRP 138
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 29.9 bits (64), Expect = 0.94
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Frame = +3
Query: 423 HLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQCHVNL---------LPNIKQKVLPRC 575
++Q + D+ + +E LV ++ NE CHV++ LP +K LP
Sbjct: 771 NVQMLFVYHDQFSRAQEDELVSVFFAGLQKWNEACHVSIHSLMLCCYELPVSIRKQLPAI 830
Query: 576 ILCMKDFSTRKTLKRHIKKFHDCFE--VDELANF--GSRRRIFNVECDQCMKNFNGDLHY 743
++ + T+ L HI +F D +ANF R+IF + +
Sbjct: 831 LVTLSRLITKPDLSVHILEFLCSLARLPDLIANFTDADYRQIFAIALKYIQHR-----DF 885
Query: 744 NKYIKQKHLRDSIIFKCETCGSSY-NSLEYSIQRYKFMNLEVNKSK 878
K K + +SI+ + SSY +L YS+ + F++L + + K
Sbjct: 886 TKESKDSNDTESIL---KNSYSSYVLALAYSVLQIWFLSLRLTERK 928
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 417 TIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQCHVNLLPNIKQKVLPRCILCMKDF 596
+ +++T ++D K E+ V K ++F + +L +I ++++P + C DF
Sbjct: 389 SFNIETSSPSQDTSSKAEDSPTVQKIADDF---SSAVGKDLRTDIIEQIIPLTLCCKHDF 445
Query: 597 STRKTLKRHIK 629
ST + +K K
Sbjct: 446 STPRDVKLSFK 456
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +3
Query: 84 HNNDTWSKCDYCDK--------QFKSKRNIRRHIEYTHLGMKRYKCIECE-TLFKEKRSL 236
H + +C CD+ FK+ ++ RH E H + +C+E + +F + L
Sbjct: 263 HCREKHERCYICDQVAGRPTHQYFKNYDSLERHFEKDHYICRERECLERKFVVFGTEIDL 322
Query: 237 RKHVRTKHPNS 269
+ H +HP++
Sbjct: 323 KAHQLDEHPHN 333
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 192 KCIECETLFKEKRSLRKHVRTKHPNSVLFPEC--HICHKRFESAKSCKIHLKLLH 350
KC C T F + L KH R KH + + H+ F++ S + H + H
Sbjct: 246 KCEFCNTHFYDDDELFKHCREKHERCYICDQVAGRPTHQYFKNYDSLERHFEKDH 300
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 36 VXSPGLQXIRHEVKIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHL 176
+ +P I H+ +V N +C+ C K++K+ ++ H ++HL
Sbjct: 379 ITTPTPAPIPHQGFVVENKPY--RCEVCSKRYKNLNGLKYHRTHSHL 423
>SPAC9.13c |cwf16|SPAPJ735.01c|splicing factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 222 EKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCG 380
E++ L K++ + S+ P+ K+F+ K+ ++L+ F+M H CG
Sbjct: 3 ERKVLNKYIPPDYDPSIRPPKKK---KKFQGPNGGKLTVRLMTPFSMRCHTCG 52
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 732 DLHYNKYIKQKHLRDSIIFKCETCGSSYNSLEYSIQ 839
D HY+ +K ++D I KC+ +NS + I+
Sbjct: 99 DKHYDYRLKSHRIKDKITTKCKGTTKYFNSRHFEIK 134
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 819 SLEYSIQRYKFMNLEVNKSK*Y*VTGXSXMSDEGEASHLGXDLYMNDGPGSPLGHEQEL 995
SLE + +F+ L KS + + G S SH+G D N+ P L + Q L
Sbjct: 746 SLEDDFDQLQFLTLAKRKSCKFFLFGLSLPLKSPNDSHVGTDFKKNNEPLDKLTYSQYL 804
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 180 MKRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPECHI--CHKRF 308
MK Y+C C+ +F + +H+R+ H F EC C KRF
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRS-HTGEKPF-ECSYPSCKKRF 43
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 27.5 bits (58), Expect = 5.0
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Frame = +3
Query: 288 HICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLA------E 449
H+ H F A + K+ ++L + + G C+ SSN++ QT+ E
Sbjct: 874 HLLHYDFIKADAQKLLPQILTAIHSQYSFRGYCS---SSNQSFLELSQTECQRLDAWENE 930
Query: 450 DEIYKCEEC--NLVFKGQENFEQHNEQCHVNLLPNIKQKVLP 569
+EI +C C NL+ + Q ++ VNL N K++P
Sbjct: 931 NEILQCVCCRFNLIIGSEYYVPQSHQSDSVNLTSNDAIKIIP 972
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -2
Query: 826 SKELYE--LPHVSHLNMMESRKCFCL 755
SK +E L H+SHLN E K +C+
Sbjct: 2142 SKNYFEKSLSHMSHLNAKEKAKIYCM 2167
>SPAC22F8.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 133
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 576 ILCMKDFSTRKTLKRHIKKFHDC--FEVDELANFGSRRRIFNVECDQCMKNFN 728
+LC+K +T+K K H+ C F + + G+ R + C+K N
Sbjct: 81 VLCLKPMATKKANKMHVFMQAACFHFRIATMTVIGNMARSDHDTALNCVKRIN 133
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = +3
Query: 99 WSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKHPNSVLF 278
W+ CD + + ++R H+ L + C +C F + KH++ H
Sbjct: 1037 WASCDMVLPSEEFEMHLRGHLNNIRLNCEVSNCKKC---FSNYEDMFKHLQHSHLPFKFT 1093
Query: 279 PECHI 293
PE I
Sbjct: 1094 PESFI 1098
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 282 ECHICHKRFESAKSCKIHLKLLHS 353
+C C F S +CK H+K HS
Sbjct: 209 DCLFCAASFSSFDTCKKHMKASHS 232
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 147 IRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTK 257
I R +E ++ ++C+ C K K+ LR+H+ K
Sbjct: 132 INRLLEKIKNELESFRCLCCHVPCKNKKLLREHMNNK 168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,631,700
Number of Sequences: 5004
Number of extensions: 97028
Number of successful extensions: 342
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 826566558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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