Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_A03_e305_01.seq
(1481 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 43 7e-04
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 39 0.012
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 39 0.012
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 38 0.020
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 36 0.062
01_06_1412 - 37140654-37141088,37141549-37142214 32 1.0
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 32 1.3
05_05_0022 + 21592403-21593083,21593720-21594208 31 1.8
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 31 1.8
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 31 2.3
09_02_0366 + 7941550-7942161,7942230-7942775 31 2.3
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 31 2.3
03_06_0465 - 34130083-34130340,34130421-34130541,34131158-341311... 31 3.1
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 30 4.1
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 30 4.1
07_03_1165 - 24459156-24460139 30 4.1
07_01_0891 - 7447079-7447330,7447431-7447554,7449571-7449793,744... 30 4.1
09_04_0564 + 18565583-18566449,18569662-18570123 30 5.4
08_02_1172 + 24898290-24899141,24900864-24901328 30 5.4
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 30 5.4
03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811 30 5.4
01_01_0476 + 3505799-3506479,3506639-3506897,3508427-3508550,350... 29 7.1
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 29 9.4
02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875 29 9.4
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 42.7 bits (96), Expect = 7e-04
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 34/223 (15%)
Frame = +3
Query: 75 KIVHNNDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCI--ECETLFKEKRSLRKHV 248
K+VH D C C F+ ++++H++ +H + + C +C + K L +H+
Sbjct: 53 KVVHEGD--HTCQECGASFQKPAHLKQHMQ-SHSDERSFICPLEDCPFSYIRKDHLNRHM 109
Query: 249 RTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHP-----CGL--CTISFSSN 407
KH + C ++F + + H+K +H T C C F
Sbjct: 110 -LKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYA 168
Query: 408 EALTIHLQTKHLAED--EIYKCEE-CNLVFKGQENFEQHNEQCHV----------NLLPN 548
+ H + H+ D E+ CE C F E HN+ CH +L N
Sbjct: 169 SKMKKH-EESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKN 227
Query: 549 IKQKV-----LP-----RCIL--CMKDFSTRKTLKRHIKKFHD 641
IK+ + +P +C C FS + L +HIK HD
Sbjct: 228 IKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHD 270
Score = 40.3 bits (90), Expect = 0.004
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 3/186 (1%)
Frame = +3
Query: 171 HLGMKRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLH 350
H ++RYKC C + +K +R H+ H + E + + K++H
Sbjct: 8 HRDIRRYKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGE-----------KVVH 56
Query: 351 SFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQCH 530
H C C SF L H+Q+ I E+C + +++ +H
Sbjct: 57 E---GDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRH----- 108
Query: 531 VNLLPNIKQKVLPRCIL--CMKDFSTRKTLKRHIKKFHDCFEVDELANFGSRRRIFNVE- 701
+L + Q L C + C + FS + ++RH+K+ H+ DE A +R+ + E
Sbjct: 109 --MLKH--QGKLFTCSMDGCGRKFSIKANMQRHVKEIHE----DETATKSNRQFVCKEEG 160
Query: 702 CDQCMK 719
C++ K
Sbjct: 161 CNKVFK 166
Score = 40.3 bits (90), Expect = 0.004
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 12/157 (7%)
Frame = +3
Query: 111 DYCDKQFKSKRNIRRHIEYTH------LGMKRYKCIE--CETLFKEKRSLRKHVRTKHPN 266
D C ++F K N++RH++ H +++ C E C +FK ++KH +
Sbjct: 122 DGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKL 181
Query: 267 SVLFPEC--HICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKH 440
+ C C K F + + + H + H + + CG + + L H +
Sbjct: 182 DYVEVVCCEPGCMKTFTNVECLRAHNQACHQY-VQCDICGEKHLKKNIKRHLRAH---EE 237
Query: 441 LAEDEIYKC--EECNLVFKGQENFEQHNEQCHVNLLP 545
+ E KC E C F + N +H + H + P
Sbjct: 238 VPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKP 274
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 38.7 bits (86), Expect = 0.012
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 195 CIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHP 374
C C+ F +++ L +H + KH F +CH+CHK+ +A IH+ +H ++ P
Sbjct: 13 CYYCDREFDDEKILVQHQKAKH-----F-KCHVCHKKLSTAGGMAIHVLQVHKESVTKVP 66
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRTKHPNSV 272
C YCD++F ++ + +H + H +KC C + HV H SV
Sbjct: 13 CYYCDREFDDEKILVQHQKAKH-----FKCHVCHKKLSTAGGMAIHVLQVHKESV 62
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 38.7 bits (86), Expect = 0.012
Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 18/162 (11%)
Frame = +3
Query: 105 KCDYCDKQFKSKRNIRRHIEYTHLGMKR-----YKCIECETLFKEKRSLRKHVRTKHPNS 269
KC C ++F + + H H R Y C C F +R L +HV+ KH
Sbjct: 464 KCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQ 523
Query: 270 VL----FPECHICHKRFESAKSCKIHLKLLHS--FNMNTH----PCGLCTISFSSNEALT 419
L C C+ F + H+ HS F++ H P G +I + +
Sbjct: 524 YLQYSTLLRCISCNSNFLNTDLLWQHIVSDHSRDFSLLDHVPRRPRGQ-SIKRTERASDE 582
Query: 420 IHLQTKHLAED---EIYKCEECNLVFKGQENFEQHNEQCHVN 536
+ +L +D + + C C ++F + H++ H N
Sbjct: 583 LLYDNHNLGKDDGLQKFTCRLCGMMFDLLPDLGHHHQVAHTN 624
Score = 34.3 bits (75), Expect = 0.25
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 462 KCEECNLVFKGQENFEQHNEQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHD 641
KC+ C+ F + H + H + + + C +CM F+ R+ L+RH+++ H
Sbjct: 464 KCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGY--SCAVCMDSFTNRRVLERHVQEKHG 521
Query: 642 CFEVDELANFGSRRRIFNVECDQCMKNF-NGDLHYNKYIKQKHLRD 776
+ + + R C C NF N DL + ++I H RD
Sbjct: 522 A----QYLQYSTLLR-----CISCNSNFLNTDLLW-QHIVSDHSRD 557
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 37.9 bits (84), Expect = 0.020
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 10/153 (6%)
Frame = +3
Query: 117 CDKQFKSKRNIRRHIEYTHL------GMKRYKCIE--CETLFKEKRSLRKHVRT--KHPN 266
C+++F K NI+RH++ H K + C E C FK L+KH + K
Sbjct: 323 CNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDY 382
Query: 267 SVLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQTKHLA 446
S + C K F + + K H K H ++ CG + + +H + +
Sbjct: 383 SEVICCEPGCMKAFTNLECLKAHNKSCHR-HVVCDVCGTKQLKKNFKRHQRMH-EGSCVT 440
Query: 447 EDEIYKCEECNLVFKGQENFEQHNEQCHVNLLP 545
E ++C L F + N ++H + H P
Sbjct: 441 ERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRP 473
Score = 31.1 bits (67), Expect = 2.3
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 24/202 (11%)
Frame = +3
Query: 285 CHICHKRFESAKSCKIHLKLL-HSFNMNTHPCGLCTISFSSNEALTIHLQTKH-----LA 446
CH+ F ++ ++ LL H + P C F+ + H+Q H
Sbjct: 289 CHVDGCPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCE 348
Query: 447 EDEIYKC--EECNLVFKGQENFEQHNEQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKR 620
+ + C E C FK ++H E+ HV L +V+ CMK F+ + LK
Sbjct: 349 SKKEFICPEENCGKTFKYASKLQKH-EESHVKL---DYSEVICCEPGCMKAFTNLECLKA 404
Query: 621 HIKKFH-----DCFEVDEL-ANFGSRRRIFNVEC---------DQCMKNFNGDLHYNKYI 755
H K H D +L NF +R+ C C +F+ + +K++
Sbjct: 405 HNKSCHRHVVCDVCGTKQLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHV 464
Query: 756 KQKH-LRDSIIFKCETCGSSYN 818
K H + + CG S++
Sbjct: 465 KAVHEQKRPFVCGFSGCGKSFS 486
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 36.3 bits (80), Expect = 0.062
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Frame = +3
Query: 108 CDY--CDKQFKSKRNIRRHIEYTHLGMKRYKCIE--CETL--FKEKRSLRKHVRTKHPNS 269
C Y CDK+F ++RH H G K + C C + F +L+ H++T ++
Sbjct: 74 CHYAGCDKKFLDSSKLKRHF-LIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDN 132
Query: 270 VLFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCGLCT 389
+ C +RF + H+K H +P G T
Sbjct: 133 YHVCKYPECARRFTQESKLRAHIKQQHEKGGLQNPGGSAT 172
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 32.3 bits (70), Expect = 1.0
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 105 KCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRT 254
+C C K F K + R H + + G KR+ C C + FK KRSL HVR+
Sbjct: 291 RCRRCAKPFAVKGDWRTHEK--NCG-KRWFCA-CGSDFKHKRSLNDHVRS 336
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 31.9 bits (69), Expect = 1.3
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +3
Query: 171 HLGMKRYKCIECETLFKEKRSLRKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLKLLH 350
H + ++C C+ F+ ++ L +H +H N V C + + ++H LL
Sbjct: 954 HFDINEWRCGFCKKAFRAEKFLDQHFHNRHNNLVDNSLADSCFPINQGQSASRLHEFLLR 1013
Query: 351 SFNMNTHPC 377
F + H C
Sbjct: 1014 QF-CDAHTC 1021
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRT 254
C C K F K + R H + + G KR+ C C + FK KRSL HVR+
Sbjct: 300 CRRCAKPFAVKGDWRTHEK--NCG-KRWFCA-CGSDFKHKRSLNDHVRS 344
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 31.5 bits (68), Expect = 1.8
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Frame = +3
Query: 108 CDY--CDKQFKSKRNIRRHIEYTHLGMKRYKCIE--CETLFKEKRSLRKHVRTKHPNSVL 275
C Y C K F +R+H + H ++Y C E C F + L++H H
Sbjct: 89 CSYENCGKTFVDVAALRKHA-HVH-NERQYICQEPGCGKKFVDSSKLKRH-HLIHTGQKD 145
Query: 276 FPECHI-CHKRFESAKSCKIHLKLLHSFNMNTHPCGLCTISFSSNEALTIHLQ 431
F H C K F + + HLK N + P C F+S+ L H++
Sbjct: 146 FICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVK 198
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 31.1 bits (67), Expect = 2.3
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Frame = +3
Query: 168 THLGMKRYKCIECETLFKEKRSL--RKHVRTKHPNSVLFPECHICHKRFESAKSCKIHLK 341
THL K+++ L + K+S + TK + L C +C +F + HLK
Sbjct: 181 THLKGKKHQANTQALLEQNKKSSVNPESQGTKAAAATLI--CRVCQAKFTCQSDLQSHLK 238
Query: 342 LL-HSFNMNTHPCGLCTISFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHN 518
++ H N+ + + +++E+L++ E+Y C+ C++ + FE+
Sbjct: 239 VMKHQLNLRAPSSDGSSFTSATSESLSL----------ELYSCKVCSV----KCTFERML 284
Query: 519 EQCHVNLLPNIKQKVLP-RCILCMKDFSTRKTLKRH 623
H+ ++KQ+ L C +C ++ K L H
Sbjct: 285 AY-HLTGKKHLKQENLQLSCEICKLQCNSEKVLSDH 319
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 31.1 bits (67), Expect = 2.3
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVRT 254
C C K+F + + R H + + G K + C+ C + FK KRSL+ HVR+
Sbjct: 281 CRRCGKRFAVRGDWRTHEK--NCG-KLWFCV-CGSDFKHKRSLKDHVRS 325
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 429 QTKHLAED-EIYKCEECNLVFKGQENFEQH 515
Q + +A+D Y+C++CNL F GQ + H
Sbjct: 301 QDETVADDINSYECQQCNLTFHGQSAYAHH 330
>03_06_0465 -
34130083-34130340,34130421-34130541,34131158-34131186,
34132259-34132382,34132594-34132816,34132948-34132980,
34133106-34133208
Length = 296
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 90 NDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSL 236
N+ W CD C++ F K + H+ K YKC +C + +K L
Sbjct: 250 NEFWIGCDICERWFHGKCVRITPAKAEHI--KHYKCPDCSSSSSKKTRL 296
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 408 EALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQ 524
+A + L + L E + Y CE CN F+ +N + H +
Sbjct: 49 DAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRR 87
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 408 EALTIHLQTKHLAEDEIYKCEECNLVFKGQENFEQHNEQ 524
+A + L + L E + Y CE CN F+ +N + H +
Sbjct: 48 DAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRR 86
>07_03_1165 - 24459156-24460139
Length = 327
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 276 FPECHICHKRFESAKSCKIHLKLLHSFN 359
FP CH+C+K F S K+ H+++ H+ N
Sbjct: 113 FP-CHLCNKEFGSRKAVHGHMRVHHAEN 139
>07_01_0891 -
7447079-7447330,7447431-7447554,7449571-7449793,
7449891-7449923,7450042-7450144
Length = 244
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 90 NDTWSKCDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKR 230
N+ W CD C++ F K + H+ K YKC +C + K ++
Sbjct: 200 NEFWIGCDICERWFHGKCVRITPAKAEHI--KHYKCPDCSSSKKSRQ 244
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVR 251
C C K F K + R H + + G K + C+ C + FK KRSL+ H R
Sbjct: 359 CRKCGKAFAVKGDWRTHEK--NCG-KLWYCL-CGSEFKHKRSLKDHAR 402
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 108 CDYCDKQFKSKRNIRRHIEYTHLGMKRYKCIECETLFKEKRSLRKHVR 251
C C K F K + R H + + G K + C+ C + FK KRSL+ H R
Sbjct: 354 CRKCGKAFAVKGDWRTHEK--NCG-KLWYCL-CGSEFKHKRSLKDHAR 397
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 29.9 bits (64), Expect = 5.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 459 YKCEECNLVFKGQENFEQH 515
Y+C++CNL F GQ + H
Sbjct: 318 YECQQCNLTFHGQSAYAHH 336
>03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811
Length = 79
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 93 DTWSKCDYCDKQFKSKRNIRRHIEYTHLGM 182
+TW KC Y D + KS RN + + H+ +
Sbjct: 44 NTWEKCVYGDSEIKSTRNGKVQLGIEHMNL 73
>01_01_0476 +
3505799-3506479,3506639-3506897,3508427-3508550,
3508922-3509030
Length = 390
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 336 LKLLHSFNMNTHPCGLCTISFSSNEAL 416
LKLLH ++P GLC +S SN ++
Sbjct: 135 LKLLHQIETQSNPKGLCCLSHHSNTSV 161
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 345 VVSNGSYKISPIRIFCGIYDIRETTLNSGASYARAFSNSVSL*IASRIQCTYI 187
+ ++ YK IR FC +YD +E A + S S+ A R CTY+
Sbjct: 75 IAADSLYKAKLIRGFCHLYDGQEAV---AVGMEAAITRSDSIITAYRDHCTYL 124
>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
Length = 356
Score = 29.1 bits (62), Expect = 9.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 171 HLGMKRYKCIE-CETLFKEKRSLRKHVRTKHPN---SVLFPECHICHKRFESAKSCKIHL 338
HL K+ C E C + L+KH + KHPN S + P + + F+ + L
Sbjct: 152 HLNQKKRCCEESCCSYVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVL 211
Query: 339 KLLHSFNMNTHPCGLCTISFSSNEA 413
+H+ N G I + ++A
Sbjct: 212 STIHAQVPNGIVLGDYVIEYGDDDA 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,858,916
Number of Sequences: 37544
Number of extensions: 588244
Number of successful extensions: 1429
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4733660064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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