Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_A02_e297_02.seq
         (1405 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O98719 Cluster: Maturase-like protein; n=1; Euglena vir...    34   7.8  

>UniRef50_O98719 Cluster: Maturase-like protein; n=1; Euglena
           viridis|Rep: Maturase-like protein - Euglena viridis
          Length = 758

 Score = 34.3 bits (75), Expect = 7.8
 Identities = 19/55 (34%), Positives = 32/55 (58%)
 Frame = +1

Query: 85  ITFIIFYLIS*EKAFHLKKNVNTLRWRFCLRLCTMSAAVCNFFFFYFNKIITLVR 249
           + F  +YL++    F  +KN++ LR+   + L  + +   NFF F+F KI+T VR
Sbjct: 318 VQFKNYYLMTNVSTFLFEKNISYLRYFSHIILGVIGSK--NFFNFFFKKILTFVR 370


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,206,581
Number of Sequences: 1657284
Number of extensions: 3398517
Number of successful extensions: 5972
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5965
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 147396980276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)