BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030723E4_A01_e289_01.seq (1463 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0386 + 3023431-3023522,3023951-3024097,3024227-3024308,302... 30 5.3 06_03_0437 - 20765682-20765951,20766040-20766294,20766374-207665... 30 5.3 >12_01_0386 + 3023431-3023522,3023951-3024097,3024227-3024308, 3024801-3024842,3024930-3024989,3025430-3027109, 3027239-3027340,3027461-3027604,3027704-3027829, 3027933-3028100 Length = 880 Score = 29.9 bits (64), Expect = 5.3 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +2 Query: 98 KANL-KNGLCMAVMDDSSSSLNGKNGYKQEVGSEVPNS 208 +ANL NG V+D SS +G GYK V + P+S Sbjct: 348 EANLYNNGTSSQVLDQRCSSTSGMAGYKPSVSYKFPHS 385 >06_03_0437 - 20765682-20765951,20766040-20766294,20766374-20766545, 20766964-20767097,20767205-20767288,20767369-20767659, 20767867-20768214,20768321-20768496,20768579-20768695, 20768780-20768936,20769110-20769225,20769323-20769483, 20769567-20769883,20769969-20770250,20770347-20770648, 20771977-20772067,20773203-20773256,20773723-20773812 Length = 1138 Score = 29.9 bits (64), Expect = 5.3 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 493 FKRFHINVKHENCQCVPYNRGLSYGTARVIS 585 FKRFH+ ++ EN VP+++ S+ A V S Sbjct: 209 FKRFHVGLQLENHLSVPFDKTRSHQAALVFS 239 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,135,109 Number of Sequences: 37544 Number of extensions: 502925 Number of successful extensions: 924 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 903 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 924 length of database: 14,793,348 effective HSP length: 85 effective length of database: 11,602,108 effective search space used: 4664047416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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