SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_H09_e168_15.seq
         (1513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538          209   4e-54
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006          209   5e-54
05_01_0043 - 295041-295173,296252-296537,296616-296697                209   5e-54
01_07_0267 + 42410174-42410252,42410679-42411097                      198   7e-51
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062...   158   1e-38
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252...    93   7e-19
06_03_0363 + 19904002-19905792                                         38   0.027
04_01_0244 - 3194141-3195091,3195301-3195312                           33   0.78 
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382...    31   1.8  
03_02_0024 + 5079690-5081351                                           31   1.8  
03_01_0269 + 2080338-2080508,2081086-2081335,2081432-2082648,208...    31   2.4  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    31   3.1  
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    31   3.1  
09_06_0081 + 20745627-20748144,20748211-20748308                       30   5.5  
07_01_0312 + 2214050-2214556                                           30   5.5  
03_06_0316 + 33091194-33091370,33091451-33092155                       30   5.5  
01_01_0490 + 3620523-3623403,3623524-3623996                           30   5.5  
05_04_0162 + 18645459-18645827,18645934-18646149,18646224-186462...    29   7.3  
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544...    29   7.3  
11_08_0005 + 27536091-27536761,27539697-27539890,27540097-275402...    29   9.6  
11_01_0392 + 2955442-2956876,2957694-2957851                           29   9.6  
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136...    29   9.6  

>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
          Length = 165

 Score =  209 bits (511), Expect = 4e-54
 Identities = 98/147 (66%), Positives = 121/147 (82%)
 Frame = +2

Query: 248 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 427
           PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 12  PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71

Query: 428 VAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 607
           +AV+I+  ++  +  Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR  AQQP+LF
Sbjct: 72  IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131

Query: 608 VGMILILIFAEVLGLYGLIVAIYLYTK 688
           VGMILILIFAE L LYGLIV I L ++
Sbjct: 132 VGMILILIFAEALALYGLIVGIILSSR 158



 Score = 29.9 bits (64), Expect = 5.5
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 242 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAV--MRPEQIMKSIIPVVMAGIIAI 415
           Y  F G    +S +     G A G A    G A +     +P+  +  I+ ++ A  +A+
Sbjct: 87  YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146

Query: 416 YGLVVAVLIAGSLDQ 460
           YGL+V ++++    Q
Sbjct: 147 YGLIVGIILSSRAGQ 161


>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
          Length = 165

 Score =  209 bits (510), Expect = 5e-54
 Identities = 97/147 (65%), Positives = 121/147 (82%)
 Frame = +2

Query: 248 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 427
           PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 12  PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71

Query: 428 VAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 607
           +AV+I+  ++  +  Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR  AQQP+LF
Sbjct: 72  IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131

Query: 608 VGMILILIFAEVLGLYGLIVAIYLYTK 688
           VGMILILIFAE L LYGLIV I L ++
Sbjct: 132 VGMILILIFAEALALYGLIVGIILSSR 158



 Score = 29.9 bits (64), Expect = 5.5
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 242 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAV--MRPEQIMKSIIPVVMAGIIAI 415
           Y  F G    +S +     G A G A    G A +     +P+  +  I+ ++ A  +A+
Sbjct: 87  YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146

Query: 416 YGLVVAVLIAGSLDQ 460
           YGL+V ++++    Q
Sbjct: 147 YGLIVGIILSSRAGQ 161


>05_01_0043 - 295041-295173,296252-296537,296616-296697
          Length = 166

 Score =  209 bits (510), Expect = 5e-54
 Identities = 97/147 (65%), Positives = 121/147 (82%)
 Frame = +2

Query: 248 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 427
           PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 13  PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72

Query: 428 VAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 607
           +AV+I+  ++  +  Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR  AQQP+LF
Sbjct: 73  IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 132

Query: 608 VGMILILIFAEVLGLYGLIVAIYLYTK 688
           VGMILILIFAE L LYGLIV I L ++
Sbjct: 133 VGMILILIFAEALALYGLIVGIILSSR 159



 Score = 31.1 bits (67), Expect = 2.4
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = +2

Query: 233 NPIYGPFF---GVMGAASAIIFSSLGAAYGTAKSGTGIAAMAV--MRPEQIMKSIIPVVM 397
           NP   P+F   G    +S +     G A G A    G A +     +P+  +  I+ ++ 
Sbjct: 82  NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141

Query: 398 AGIIAIYGLVVAVLIAGSLDQ 460
           A  +A+YGL+V ++++    Q
Sbjct: 142 AEALALYGLIVGIILSSRAGQ 162


>01_07_0267 + 42410174-42410252,42410679-42411097
          Length = 165

 Score =  198 bits (484), Expect = 7e-51
 Identities = 93/149 (62%), Positives = 116/149 (77%)
 Frame = +2

Query: 242 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYG 421
           + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPE +MKSI+PVVMAG++ IYG
Sbjct: 10  FAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVLGIYG 69

Query: 422 LVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
           L++AV+I   ++  +  Y  + G +HL AGLA G   LAAG AIG+VGDAGVR  AQQP+
Sbjct: 70  LIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVVGDAGVRANAQQPK 129

Query: 602 LFVGMILILIFAEVLGLYGLIVAIYLYTK 688
           LFVGMILILIFAE LGLYGLIV I L ++
Sbjct: 130 LFVGMILILIFAEALGLYGLIVGIILSSR 158


>02_04_0181 -
           20705307-20705439,20705991-20706037,20706181-20706229,
           20706685-20707055
          Length = 199

 Score =  158 bits (383), Expect = 1e-38
 Identities = 70/111 (63%), Positives = 92/111 (82%)
 Frame = +2

Query: 248 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 427
           PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 14  PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73

Query: 428 VAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 580
           +AV+I+  ++  +  Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 74  IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124



 Score = 39.9 bits (89), Expect = 0.005
 Identities = 26/82 (31%), Positives = 41/82 (50%)
 Frame = +2

Query: 440 IAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMI 619
           +AG+     +    + GF+   A L     G A G A   VG A +     +P L +  I
Sbjct: 1   MAGASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMG--VMRPELVMKSI 58

Query: 620 LILIFAEVLGLYGLIVAIYLYT 685
           + ++ A VLG+YGLI+A+ + T
Sbjct: 59  VPVVMAGVLGIYGLIIAVIIST 80


>01_05_0664 +
           24122958-24123070,24123184-24123261,24125040-24125210,
           24125288-24125456
          Length = 176

 Score = 92.7 bits (220), Expect = 7e-19
 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
 Frame = +2

Query: 254 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 433
           F  +G A +I  S LGAA+G   +G+ +   A+  P    K++I V+    +AIYG++VA
Sbjct: 20  FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79

Query: 434 VLIAGSLDQ-PS----NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 598
           +++   L+  P+    +  +L  G+    +GL VGF+ L  G  +GI+G +     AQ  
Sbjct: 80  IILQTKLESVPTALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQNS 139

Query: 599 RLFVGMILILIFAEVLGLYGLIVAIYL 679
            LFV +++I IF   LGL+G+IV I +
Sbjct: 140 SLFVKILVIEIFGSALGLFGVIVGIIM 166



 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = +2

Query: 491 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 670
           F  +G  +++G S L A + I I G + +    + PR+    ++ +IF E + +YG+IVA
Sbjct: 20  FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79

Query: 671 IYLYTK 688
           I L TK
Sbjct: 80  IILQTK 85


>06_03_0363 + 19904002-19905792
          Length = 596

 Score = 37.5 bits (83), Expect = 0.027
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
 Frame = +2

Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGT----GIAAMAVM-RPEQIMKSIIPVVMA 400
           PIY      +GAA   +FSSL      +   T     + A+A++ R   +  +  P  + 
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459

Query: 401 GIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAA 541
             +A   LVV   I  S    S     + G+   G G A G +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYNSRYARRWPGYAAFGCGWAAGAAGLAA 506


>04_01_0244 - 3194141-3195091,3195301-3195312
          Length = 320

 Score = 32.7 bits (71), Expect = 0.78
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 651 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARPAP 502
           R  T+A +RI++ P N       P  PA+P +P A PAA    P    AP
Sbjct: 196 RKTTTAPVRIQLAPRNP----PPPAAPAAPPVPPAVPAAPAPAPVHMSAP 241


>07_03_1215 +
           24937016-24937229,24937418-24937623,24938135-24938207,
           24938619-24938812
          Length = 228

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 555 PMAKPAARPEKPTARPAPK*M 493
           P AKPAA+P+KP  +P P+ M
Sbjct: 91  PAAKPAAKPKKPPVKPLPEMM 111


>03_02_0024 + 5079690-5081351
          Length = 553

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +2

Query: 392 VMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 565
           V+AGII IY LV ++    + D     YT+    +   AG  +   GLA  +AI ++G
Sbjct: 98  VLAGIINIYSLVGSLAAGRTSDWIGRRYTMVLASVIFFAGALI--MGLAPSYAIVMLG 153


>03_01_0269 +
           2080338-2080508,2081086-2081335,2081432-2082648,
           2082933-2083083,2083247-2083563
          Length = 701

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -3

Query: 599 WAVGPYHVRL--HHRRCLWRNRPLDQRNLRRDQHP-SE*TLYTGCSYCWAGLGNLQSGQL 429
           + +G +H      +RR LW N  LD++ + R Q   +   LY+GC  C   L +   G  
Sbjct: 186 YKLGGFHFEAISSYRRALWSNWNLDEKTIGRIQKEFAVLLLYSGCETCSPNLLSQLDGSF 245

Query: 428 RP 423
            P
Sbjct: 246 VP 247


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = -2

Query: 588 AVPRTPASPTMPMAKPAARPEKPTARPAPK*MNPLYRV*LLLGWSREPAIRTATTSP*MA 409
           A P  P  P  P   PAA P  P   PAP+   P+         +  P +  AT  P   
Sbjct: 219 APPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPMAAA--PRQPAALPPVPGATVVPFTT 276

Query: 408 MIPAMTTGMMD 376
           M  A++  MM+
Sbjct: 277 MQAAVSRNMME 287


>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 3/111 (2%)
 Frame = -2

Query: 573 PASPTMPMAKP--AARPEKPTARPAPK*MNPLYRV*LLLGWSREPAIRTATTSP*MAMIP 400
           PASP +P A P  AA P  P   P P+      +       S  P   T TT P  A +P
Sbjct: 61  PASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPP-TAPVP 119

Query: 399 AMTTGMMDFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAA-PITPKK 250
           A               +A +  P P    P  +P  L   A AA P  P K
Sbjct: 120 AAAPP----PTAPSPYSAPSPTPTPTHTQPRPSPPLLPTPATAADPANPNK 166


>09_06_0081 + 20745627-20748144,20748211-20748308
          Length = 871

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 630 MRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARPA 505
           +R R  PT+     A PR P  P    A PAA P  P+  P+
Sbjct: 701 LRARRAPTSPPAA-ATPRAPTPPAAAAAAPAAPPALPSGLPS 741


>07_01_0312 + 2214050-2214556
          Length = 168

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = -2

Query: 588 AVPRTPASPTMPMAKPAARPEKPTARPAPK*MNPLYRV*LLLGWSREPAIRTATTSP*MA 409
           A+P  PA P + +    A P  PT  PA     P      L      PA+  A   P M 
Sbjct: 77  ALPPMPAVPKVALPPMPAVPAVPTV-PAV----PAVPAASLPPMPAVPAVPNAVLPP-MP 130

Query: 408 MIPAMTTGMMDFMICSGRIT--AMAAIPVPDLAVPYAA 301
            +P +T   M  M    ++T   M ++P+P LA P +A
Sbjct: 131 AVPKVTLPPMPSMPAVPKVTLPPMPSVPMPFLAPPPSA 168


>03_06_0316 + 33091194-33091370,33091451-33092155
          Length = 293

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -2

Query: 660 SPYRPNTSAKMRIRIIPTNNLGCWAVPRTPASP-TMPMAKPAARPE---KPTARPAPK 499
           +P +   +AK +    P       A P++PA P   P A P A+ +   KP A+ APK
Sbjct: 162 APAKSKAAAKPKAAAKPAAKPKAAAKPKSPAKPAAKPKAAPKAKAKPAAKPKAKAAPK 219


>01_01_0490 + 3620523-3623403,3623524-3623996
          Length = 1117

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 591  WAVPRTPASPTMPMAKPAA 535
            WA PR P SPT PMA+  A
Sbjct: 1084 WADPRQPGSPTKPMAQAQA 1102


>05_04_0162 +
           18645459-18645827,18645934-18646149,18646224-18646278,
           18646545-18646672,18647134-18647217,18648742-18648867,
           18648949-18649086
          Length = 371

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = -2

Query: 435 TATTSP*MAMIPAMTTGMMDFMICSGRITAMAAIPVPDLAVPY 307
           +AT S  +A  PA TTG      CS   TA+   PVP L   Y
Sbjct: 8   SATASSLLAPAPA-TTGAAAAQCCSSSSTALFPTPVPSLRAYY 49


>05_01_0609 +
           5443780-5443875,5444540-5445136,5448792-5448881,
           5449615-5450121
          Length = 429

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 225 WPKIQ-SMDLSLELWGRRLPSSSAPL 299
           WP ++ S D  LEL  RRLPS++ PL
Sbjct: 126 WPSVKWSSDCLLELQHRRLPSTAPPL 151


>11_08_0005 +
           27536091-27536761,27539697-27539890,27540097-27540255,
           27540385-27541493
          Length = 710

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 20/64 (31%), Positives = 22/64 (34%)
 Frame = +1

Query: 265 GGGVCHHLQLPWCCIWHSQVRHRYCRHGGDAA*ADHEIHHSRCHGGYHCHLRTGRSCPDC 444
           G G C     P C   HS   +    +G      D      RC  G  CH   G     C
Sbjct: 259 GNGSCSGSVAPACVSEHSYCAN--ATNGDGYLYIDECKEPDRCSTGSRCHDTEGGYYCKC 316

Query: 445 RFPR 456
           RFPR
Sbjct: 317 RFPR 320


>11_01_0392 + 2955442-2956876,2957694-2957851
          Length = 530

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 757 RFSSYRKSGAPATGVECVQVGLLLRVQVNGDDEPV*TQYLSENE 626
           +F SY ++  PATG++ V +G    +   G  +P+  + LSE E
Sbjct: 271 KFQSYLQN-MPATGIKVVVIGRTEDIAKFGTSQPIRVKRLSEEE 313


>02_01_0202 +
           1366149-1366594,1368444-1368444,1368616-1368743,
           1368943-1369039
          Length = 223

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +3

Query: 249 LSLELWGRRLPSSSAPLVLHMAQPSQAPVLPPWR*CGLSRS 371
           +S  L GRR PS S   +L +   ++AP LPP   C LS S
Sbjct: 87  VSAALVGRRRPSRSLRCLLLLGTSTRAPFLPP---CHLSGS 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,791,448
Number of Sequences: 37544
Number of extensions: 811929
Number of successful extensions: 2297
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4849681144
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -