BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_H09_e168_15.seq (1513 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 1e-64 SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 33 0.79 SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4 SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 31 1.8 SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8 SB_9419| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4 SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4 SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 7.4 SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 29 7.4 SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 29 7.4 SB_8303| Best HMM Match : START (HMM E-Value=0.0093) 29 7.4 SB_34252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.7 >SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 244 bits (598), Expect = 1e-64 Identities = 125/153 (81%), Positives = 136/153 (88%) Frame = +2 Query: 230 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 409 + P Y FFGVMGA +A++FS+LGAAYGTAKSGTGIAAM+VMRPE IMKSIIPVVMAGII Sbjct: 5 DQPSYVAFFGVMGATAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 64 Query: 410 AIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 589 AIYGLVVAVLI S+ S +YTLYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTA Sbjct: 65 AIYGLVVAVLIGSSI---SKDYTLYKSFLDLGAGLSVGLSGLAAGFAIGIVGDAGVRGTA 121 Query: 590 QQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688 QQPRLFVGMILILIFAEVLGLYGLIVA+ L TK Sbjct: 122 QQPRLFVGMILILIFAEVLGLYGLIVALILTTK 154 >SB_51968| Best HMM Match : PT (HMM E-Value=0.54) Length = 514 Score = 32.7 bits (71), Expect = 0.79 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = -2 Query: 651 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARPAPK*MNPL 484 +P T+ K R PT +L + +PT AKP +PT RP K PL Sbjct: 135 KPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRPTERPTKKPTKPL 190 >SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1409 Score = 31.9 bits (69), Expect = 1.4 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = +1 Query: 268 GGVCHHLQLPWCCIWHSQVRHRYCRHGGDAA*ADHEIHH----SRCHGGYHCHLRTGRSC 435 GGVC + + C+ + + C D + HH S HGGY C +G + Sbjct: 1204 GGVCKNEHGGYSCVCKAGFTGKNCEQDVDECAGVNPCHHGGVCSNSHGGYSCKCASGYTG 1263 Query: 436 PDC 444 +C Sbjct: 1264 KNC 1266 >SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) Length = 295 Score = 31.5 bits (68), Expect = 1.8 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -2 Query: 624 IRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARPAP 502 ++I+P N + PR P + T P P P PT P P Sbjct: 205 VKILPGNGVVPTQAPRPPTTQTPPTKAPTDPPVPPTNPPVP 245 >SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 116 Score = 31.5 bits (68), Expect = 1.8 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 503 GAGLAVGFSGLAAGFAIGIVG 565 GAG+ VGF LA G +G+VG Sbjct: 46 GAGMTVGFCNLACGICVGLVG 66 >SB_9419| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 150 Score = 31.1 bits (67), Expect = 2.4 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -1 Query: 442 NQDSYDQSVDGNDTRHDNGND 380 N DS D +GND+ DNGND Sbjct: 5 NDDSVDSDTNGNDSVSDNGND 25 >SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1870 Score = 29.5 bits (63), Expect = 7.4 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%) Frame = -2 Query: 585 VPRTPAS-PTMPMAKPAARPEKPTARPAP 502 +P TP P P P RP PT RP P Sbjct: 1354 IPSTPRPRPPTPPRPPTPRPRPPTPRPGP 1382 >SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) Length = 1155 Score = 29.5 bits (63), Expect = 7.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 Query: 576 TPASPTMPMAKPAARPEKPTARPAPK*MNPL 484 TPA PT+PMA A + P+ PA PL Sbjct: 1095 TPALPTIPMAPSGAPAKTPSVAPAAPSPRPL 1125 >SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) Length = 233 Score = 29.5 bits (63), Expect = 7.4 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -2 Query: 612 PTNNLGCWAVPRTPASP--TMPMAKPAARPEKPTARPAP 502 P+NN G A P TPA+P M +A P+ T P P Sbjct: 87 PSNNFGTPATPATPATPAHNMGVAGPSGMATPGTFIPPP 125 >SB_12735| Best HMM Match : PT (HMM E-Value=0.36) Length = 1148 Score = 29.5 bits (63), Expect = 7.4 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 442 NQDSYDQSVDGNDTRHDNGNDGFHDLLRPHHRHG 341 N+D+ DQS D +D + D H+L + HG Sbjct: 537 NKDAVDQSKDKDDVTQPDDTDDVHELPKDEEDHG 570 >SB_8303| Best HMM Match : START (HMM E-Value=0.0093) Length = 522 Score = 29.5 bits (63), Expect = 7.4 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +3 Query: 195 TCKYSHIQEKWPKIQSMDLSLELWGRRLPSSSAPLVLHMAQPSQAPVL 338 T + H + K +I+ D SL L RR+PSSS+ M+ P + P + Sbjct: 467 TLRKYHCEHKDDEIEEEDSSLSLEKRRMPSSSS----EMSSPDRKPYM 510 >SB_34252| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 43 Score = 29.1 bits (62), Expect = 9.7 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -1 Query: 442 NQDSYDQSVDGNDTRHDNGNDGFHD 368 N D D D ND HDN +D H+ Sbjct: 3 NDDDDDNDNDNNDDNHDNNDDNDHN 27 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 39,228,825 Number of Sequences: 59808 Number of extensions: 865433 Number of successful extensions: 2579 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2023 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2544 length of database: 16,821,457 effective HSP length: 85 effective length of database: 11,737,777 effective search space used: 4906390786 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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