BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_H09_e168_15.seq
(1513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 242 2e-63
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 242 2e-63
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 242 2e-63
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 242 2e-63
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 242 2e-63
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 242 2e-63
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 242 2e-63
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 242 2e-63
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 92 6e-18
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 92 6e-18
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 92 6e-18
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 92 6e-18
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 92 6e-18
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 92 6e-18
BC001211-1|AAH01211.2| 833|Homo sapiens kinesin family member C... 34 1.6
AB209290-1|BAD92527.1| 870|Homo sapiens Kinesin-like protein KI... 34 1.6
DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor pr... 33 2.1
BC032512-1|AAH32512.1| 184|Homo sapiens retina and anterior neu... 31 8.3
BC018709-1|AAH18709.1| 184|Homo sapiens retina and anterior neu... 31 8.3
BC007284-1|AAH07284.1| 184|Homo sapiens RAXL1 protein protein. 31 8.3
AY211277-1|AAP41547.1| 184|Homo sapiens Q50-type retinal homeob... 31 8.3
AB051541-1|BAB21845.1| 594|Homo sapiens KIAA1754 protein protein. 31 8.3
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 242 bits (593), Expect = 2e-63
Identities = 124/151 (82%), Positives = 137/151 (90%)
Frame = +2
Query: 236 PIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAI 415
P Y FF VMGA++A++FS+LGAAYGTAKSGTGIAAM+VMRPEQIMKSIIPVVMAGIIAI
Sbjct: 8 PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67
Query: 416 YGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 595
YGLVVAVLIA SL+ ++ +LYK F+ LGAGL+VG SGLAAGFAIGIVGDAGVRGTAQQ
Sbjct: 68 YGLVVAVLIANSLN---DDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQ 124
Query: 596 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 688
PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 91.9 bits (218), Expect = 6e-18
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Frame = +2
Query: 263 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 442
+G AI S +GAA+G +G+ I V P K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 443 AG-----SLDQPS--NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
+ S P + + G+ GAGL VG S L G +GIVG AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 602 LFVGMILILIFAEVLGLYGLIVAI 673
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 497 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 676
+LG GLA+ S + A + I I G + + G + PR+ ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 677 L 679
+
Sbjct: 111 I 111
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 91.9 bits (218), Expect = 6e-18
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Frame = +2
Query: 263 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 442
+G AI S +GAA+G +G+ I V P K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 443 AG-----SLDQPS--NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
+ S P + + G+ GAGL VG S L G +GIVG AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 602 LFVGMILILIFAEVLGLYGLIVAI 673
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 497 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 676
+LG GLA+ S + A + I I G + + G + PR+ ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 677 L 679
+
Sbjct: 111 I 111
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 91.9 bits (218), Expect = 6e-18
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Frame = +2
Query: 263 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 442
+G AI S +GAA+G +G+ I V P K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 443 AG-----SLDQPS--NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
+ S P + + G+ GAGL VG S L G +GIVG AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 602 LFVGMILILIFAEVLGLYGLIVAI 673
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 497 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 676
+LG GLA+ S + A + I I G + + G + PR+ ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 677 L 679
+
Sbjct: 111 I 111
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 91.9 bits (218), Expect = 6e-18
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Frame = +2
Query: 263 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 442
+G AI S +GAA+G +G+ I V P K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 443 AG-----SLDQPS--NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
+ S P + + G+ GAGL VG S L G +GIVG AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 602 LFVGMILILIFAEVLGLYGLIVAI 673
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 497 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 676
+LG GLA+ S + A + I I G + + G + PR+ ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 677 L 679
+
Sbjct: 111 I 111
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 91.9 bits (218), Expect = 6e-18
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Frame = +2
Query: 263 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 442
+G AI S +GAA+G +G+ I V P K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 443 AG-----SLDQPS--NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
+ S P + + G+ GAGL VG S L G +GIVG AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 602 LFVGMILILIFAEVLGLYGLIVAI 673
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 497 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 676
+LG GLA+ S + A + I I G + + G + PR+ ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 677 L 679
+
Sbjct: 111 I 111
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 91.9 bits (218), Expect = 6e-18
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Frame = +2
Query: 263 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 442
+G AI S +GAA+G +G+ I V P K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 443 AG-----SLDQPS--NNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 601
+ S P + + G+ GAGL VG S L G +GIVG AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 602 LFVGMILILIFAEVLGLYGLIVAI 673
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 497 HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIY 676
+LG GLA+ S + A + I I G + + G + PR+ ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 677 L 679
+
Sbjct: 111 I 111
>BC001211-1|AAH01211.2| 833|Homo sapiens kinesin family member C3
protein.
Length = 833
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -2
Query: 597 GCWAVPRTPASPTMPMAKPAARPEKPTARPAP 502
G W V R P P MA+PA P P ARP P
Sbjct: 18 GLWRVGRAP-EPEPGMARPAPAPASPAARPFP 48
>AB209290-1|BAD92527.1| 870|Homo sapiens Kinesin-like protein KIFC3
variant protein.
Length = 870
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -2
Query: 597 GCWAVPRTPASPTMPMAKPAARPEKPTARPAP 502
G W V R P P MA+PA P P ARP P
Sbjct: 62 GLWRVGRAP-EPEPGMARPAPAPASPAARPFP 92
>DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor
protein.
Length = 111
Score = 33.5 bits (73), Expect = 2.1
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 651 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPA--ARPEKPTARPAPK*MNP 487
RP A R PT A PRTPA+PT+ +PA P PT RP P+ +P
Sbjct: 31 RPPRPASPRTPAAPTVRPPRPASPRTPAAPTVRPPRPAFPGVPAAPTVRP-PRPASP 86
Score = 31.9 bits (69), Expect = 6.3
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 651 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAA--RPEKPTARP 508
RP A + PT A PRTPA+PT+ +PA+ P PT RP
Sbjct: 15 RPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPASPRTPAAPTVRP 64
>BC032512-1|AAH32512.1| 184|Homo sapiens retina and anterior neural
fold homeobox like 1 protein.
Length = 184
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 645 NTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAAR--PEKPTARPAP 502
N AK R + + G A PR P +P +P A+P A P +P P P
Sbjct: 77 NRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGP 126
>BC018709-1|AAH18709.1| 184|Homo sapiens retina and anterior neural
fold homeobox like 1 protein.
Length = 184
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 645 NTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAAR--PEKPTARPAP 502
N AK R + + G A PR P +P +P A+P A P +P P P
Sbjct: 77 NRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGP 126
>BC007284-1|AAH07284.1| 184|Homo sapiens RAXL1 protein protein.
Length = 184
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 645 NTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAAR--PEKPTARPAP 502
N AK R + + G A PR P +P +P A+P A P +P P P
Sbjct: 77 NRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGP 126
>AY211277-1|AAP41547.1| 184|Homo sapiens Q50-type retinal homeobox
protein.
Length = 184
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 645 NTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAAR--PEKPTARPAP 502
N AK R + + G A PR P +P +P A+P A P +P P P
Sbjct: 77 NRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGP 126
>AB051541-1|BAB21845.1| 594|Homo sapiens KIAA1754 protein protein.
Length = 594
Score = 31.5 bits (68), Expect = 8.3
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 465 LGWSREPAIRTATTSP*MAMIPAMTTGMMDFMICSGRITAMAAIPV 328
L WSR PA T T P + P M G+ F +C +TA+ P+
Sbjct: 25 LCWSRPPAAGTGTGDPSQSKAPTMAMGL--FRVCLVVVTAIINHPL 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,781,705
Number of Sequences: 237096
Number of extensions: 4466838
Number of successful extensions: 18807
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18686
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22471744940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -