Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_H07_e152_15.seq
         (1498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8RE40 Cluster: Putative uncharacterized protein FN1288...    35   6.3  
UniRef50_Q4YZ83 Cluster: Putative uncharacterized protein; n=2; ...    35   6.3  
UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whol...    34   8.4  

>UniRef50_Q8RE40 Cluster: Putative uncharacterized protein FN1288;
           n=1; Fusobacterium nucleatum subsp. nucleatum|Rep:
           Putative uncharacterized protein FN1288 - Fusobacterium
           nucleatum subsp. nucleatum
          Length = 56

 Score = 34.7 bits (76), Expect = 6.3
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 704 SNRWSLYYFLITKLNQIYIKKKLSPFLDFFYIFLV 808
           SNR S YY +  K N  Y  K L  FL  F+ FL+
Sbjct: 7   SNRNSYYYIITNKKNLYYFLKILKKFLTLFFFFLI 41


>UniRef50_Q4YZ83 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 296

 Score = 34.7 bits (76), Expect = 6.3
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = -3

Query: 698 IFSHYYRRNNYLLLFHNNYIIYTLYTHLVIT*ESK*FCIFIIHFSRPVTHSSELYTCF 525
           IFS+ Y + N    +H NYI Y L  +L+++        FI++F  P    + L+TCF
Sbjct: 191 IFSYIYNKYNLKKNYHLNYIYYKL-NYLILSPTKNYPLFFILNF--PYLAYNNLFTCF 245


>UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whole
            genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome undetermined SCAF14504, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1719

 Score = 34.3 bits (75), Expect = 8.4
 Identities = 26/80 (32%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
 Frame = +2

Query: 1250 RXXPRXFXXGLXTXRXLGGLXXXRGKKGWRXXPXWPXKKXXEPRPRPXXXXXPXEQTSPG 1429
            R   R    G  T +   GL   RG  G R  P  P     E    P     P E   PG
Sbjct: 173  RRRRRHLQVGAGTLQVAAGLWQKRGHGGRRAPPQPPPAPGAEGSGSPV----PGESDPPG 228

Query: 1430 XXGXEGPGXT-PPXRGXXPP 1486
              G  GPG   PP  G   P
Sbjct: 229  GSGPAGPGGVGPPPAGEHHP 248


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,068,487,512
Number of Sequences: 1657284
Number of extensions: 17693379
Number of successful extensions: 31212
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30961
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 158892113150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)