Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_H04_e128_16.seq
(1510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 44 2e-04
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 31 2.1
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 31 2.1
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 31 2.1
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 31 2.1
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 8.6
Z81581-4|CAB04663.2| 568|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 8.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 8.6
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1024 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1076
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1058 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1110
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 995 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1047
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1129 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1181
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1024 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1076
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1058 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1110
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 995 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1047
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1129 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1181
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 709 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 761
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERL 674
V ELK++L+E+D L ++RL+ L A +++ L++TV K++ E LK+ ++L
Sbjct: 1058 VIELKQELKERDSALYEVRLDNLDRAREVDVLRETVNKLKTENKQLKKEVDKL 1110
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 513 LVDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERLQR 680
+V LK + E+D + + A ++ + +LKD + K+ NE +L+ + E L++
Sbjct: 97 VVSRLKIEKEERDAAVVNATKLAQTAQVETFALKDEIKKLTNEQASLRHSKEALEK 152
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 513 LVDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERLQR 680
+V LK + E+D + + A ++ + +LKD + K+ NE +L+ + E L++
Sbjct: 97 VVSRLKIEKEERDAAVVNATKLAQTAQVETFALKDEIKKLTNEQASLRHSKEALEK 152
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 513 LVDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERLQR 680
+V LK + E+D + + A ++ + +LKD + K+ NE +L+ + E L++
Sbjct: 97 VVSRLKIEKEERDAAVVNATKLAQTAQVETFALKDEIKKLTNEQASLRHSKEALEK 152
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 31.1 bits (67), Expect = 2.1
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +3
Query: 516 VDELKRQLREK--DLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERLQR 680
+DELK+QL +K ++ ++EALS ++ + ++ + + E+L L QN E LQR
Sbjct: 995 IDELKKQLNQKISEVNKLSSKIEALSQLNRTYNEENRNLSRQLEIL-LTQNKELLQR 1050
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNL---KQNNERLQR 680
V+ LK+Q+++ ++ L E S HQ+ SL+D + + + L K++ E + R
Sbjct: 956 VEALKKQIQDLEMSLRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINR 1013
>Z81581-4|CAB04663.2| 568|Caenorhabditis elegans Hypothetical
protein T02E1.2 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 519 RPKPHPLVFLWHVLPAWREQSFLWYPVKSRENVLDCSRC 403
RPKP PL L +L W ++ + VK EN RC
Sbjct: 295 RPKPQPLEVLQLILRLWEAKTVEFEIVKFMENDYYLQRC 333
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNL---KQNNERLQR 680
V+ LK+Q+++ ++ L E S HQ+ SL+D + + + L K++ E + R
Sbjct: 956 VEALKKQIQDLEMSLRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINR 1013
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 516 VDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNL---KQNNERLQR 680
V+ LK+Q+++ ++ L E S HQ+ SL+D + + + L K++ E + R
Sbjct: 959 VEALKKQIQDLEMSLRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINR 1016
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,746,597
Number of Sequences: 27780
Number of extensions: 435971
Number of successful extensions: 1143
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4349991404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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