Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_H03_e120_15.seq
(1518 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 271 4e-72
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 271 4e-72
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 271 4e-72
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 271 4e-72
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 271 4e-72
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 271 4e-72
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-18
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 6.3
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 6.3
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 8.4
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 8.4
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 8.4
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 8.4
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (665), Expect = 4e-72
Identities = 131/171 (76%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Frame = +3
Query: 90 TSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLV 266
+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLV
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLV 80
Query: 267 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 446
RELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIV
Sbjct: 81 RELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV 140
Query: 447 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 599
GKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 271 bits (665), Expect = 4e-72
Identities = 131/171 (76%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Frame = +3
Query: 90 TSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLV 266
+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLV
Sbjct: 19 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLV 78
Query: 267 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 446
RELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIV
Sbjct: 79 RELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV 138
Query: 447 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 599
GKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 139 GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (665), Expect = 4e-72
Identities = 131/171 (76%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Frame = +3
Query: 90 TSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLV 266
+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLV
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLV 80
Query: 267 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 446
RELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIV
Sbjct: 81 RELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV 140
Query: 447 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 599
GKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (665), Expect = 4e-72
Identities = 131/171 (76%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Frame = +3
Query: 90 TSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLV 266
+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLV
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLV 80
Query: 267 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 446
RELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIV
Sbjct: 81 RELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV 140
Query: 447 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 599
GKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (665), Expect = 4e-72
Identities = 131/171 (76%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Frame = +3
Query: 90 TSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLV 266
+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLV
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLV 80
Query: 267 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 446
RELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIV
Sbjct: 81 RELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV 140
Query: 447 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 599
GKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 271 bits (665), Expect = 4e-72
Identities = 131/171 (76%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Frame = +3
Query: 90 TSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLV 266
+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLV
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLV 80
Query: 267 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 446
RELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIV
Sbjct: 81 RELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIV 140
Query: 447 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 599
GKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 GKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +3
Query: 381 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 536
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.9 bits (69), Expect = 6.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 553 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 374
T W ++ LCS++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 373 L 371
L
Sbjct: 323 L 323
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 31.9 bits (69), Expect = 6.3
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 284
VE ET S K Q +++ + KE+ E+HNK+ + M + QK Q R + ELEKK
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 99 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 266
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 267 RELEKKFSGK 296
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 99 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 266
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 267 RELEKKFSGK 296
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 99 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 266
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 267 RELEKKFSGK 296
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 99 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 266
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 267 RELEKKFSGK 296
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,571,940
Number of Sequences: 237096
Number of extensions: 4057404
Number of successful extensions: 11010
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10993
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22581363208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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