Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_H02_e112_16.seq
         (1494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   1.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   3.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   4.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   4.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   4.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   5.8  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 215 FSIFFYIFNNLIYKTYGLI*IFTKSSPFFS 126
           F+I FY++  ++ + + LI +  K   FFS
Sbjct: 46  FNIVFYMYTLILEERFKLINLIIKQEEFFS 75


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 698 YKEVLYYQNWTQ 733
           YK V YY NW+Q
Sbjct: 87  YKVVCYYTNWSQ 98


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 734 FVSNSDSIAP--LCRTSSIFCIMIRC 663
           F  +S S+ P  +  TS +FCI+I C
Sbjct: 55  FNESSSSVFPNYIRTTSMVFCIIIMC 80


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 734 FVSNSDSIAP--LCRTSSIFCIMIRC 663
           F  +S S+ P  +  TS +FCI+I C
Sbjct: 55  FNESSSSVFPNYIRTTSMVFCIIIMC 80


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 731 QRPKTCP*CXKSIRRMPH 784
           +RP +C  C K+ RR  H
Sbjct: 105 ERPYSCDICGKAFRRQDH 122


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 447 NYSKRLAFSYLEEIAQEFYQQYGKRVNTVTRPYTFIEFDT 566
           ++ + +++ +LE +A E      ++ NTVT  +T    DT
Sbjct: 106 DFLREISWIFLETVANENTTNCPEQKNTVTVTFTVQSDDT 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,021
Number of Sequences: 336
Number of extensions: 4195
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44759725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)