Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_H01_e104_15.seq
(1446 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 301 1e-83
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 1.6
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 25 2.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 2.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 4.9
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 6.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 6.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 6.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 6.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 6.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 6.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 6.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 6.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 6.5
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 8.6
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 301 bits (738), Expect = 1e-83
Identities = 154/260 (59%), Positives = 193/260 (74%), Gaps = 3/260 (1%)
Frame = +3
Query: 213 SNSTFSAINLFYVLLVPAVILWYTYWRMSRRRLYELAEKLNGPKGLPLIGNALEFVGGSA 392
S + FSA ++F LL+PA+IL++ Y+R+SRR L ELAEK+ GP LPLIGNAL+ G
Sbjct: 5 SATGFSASSVFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFGSPD 64
Query: 393 EIFSNIIQKSLAFDNESVVKIWIGPRLLVFLYDPRDVEVILSSHVHIDKADEYRFFKPWL 572
+FS +++K+ F + VVKIW+GP+L++ L DPRDVE+ILSS+V+IDK+ EYRFFKPWL
Sbjct: 65 AMFSQVLKKAENF--KDVVKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWL 122
Query: 573 GNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVEKLNKEAG-TFDCHDYM 749
G+GLLISTGQKWR+HRKLIAPTFHLNVLKSFIDLFNAN+R+VVEK+ KE G FDCH+YM
Sbjct: 123 GDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYM 182
Query: 750 SECTVEILLETAMGVSKTTQDQSGF*IRHG--RYEDVXHPSSKTHKNMAXTRSAXXN*RI 923
SE TV+ILLETAMGVSK T+D + F + D+ H H + N
Sbjct: 183 SELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILH---LRHTKIWLRPDWLFNLTK 239
Query: 924 TPKNQTKLLDXIHGLTKXVL 983
KNQ KLL+ IHGLTK V+
Sbjct: 240 YGKNQIKLLEIIHGLTKKVI 259
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +3
Query: 348 LPLIGNALEFVGGSAEIFSNIIQKSLAFDNESVVK 452
+PL+ N ++++GG + S I+K++ +N+ + K
Sbjct: 100 MPLLINVVKYLGGKHKFISKKIKKTM--ENKDITK 132
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 24.6 bits (51), Expect = 2.1
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 180 MGYATAENVVPSNSTFSAINLFYVLLVPAVILWYTYWRMSRRRLYELAEKLNGPKGL 350
+G+ T + T I +F++ P ++ YW + R Y++ +++ KGL
Sbjct: 248 IGFLTRAKIRTLKMTVIIIAVFFICWTPYYVMSLWYW-IDRNSAYKIDQRIQ--KGL 301
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 2.8
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED+ H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDLRHEDRNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 4.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDSRHEDGNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.0 bits (47), Expect = 6.5
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Frame = +3
Query: 606 WRSHRKLIAPT------FHLNVLKSFIDLFNANSRAVVEKLN 713
+R + KLI P H+N +F+ L N N + + K N
Sbjct: 35 FRGYNKLIRPVQNMTEKVHVNFGLAFVQLINVNEKNQIMKSN 76
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDSRHEDRNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDSRHEDRNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDSRHEDRNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDSRHEDRNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 834 HGRYEDVXHPSSKTHKNMAXTRSAXXN*RITPKNQTKLLDXIHGL 968
H RYED H +++N RS + K + + D +H +
Sbjct: 231 HSRYEDSRHEDRNSYRN-DGERSCSRDRSREYKKKDRRYDQLHNV 274
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 293 PPVSVPENHSRYEKYVKEVDSGERA 219
PPV +PENH + KY+ ++ A
Sbjct: 358 PPV-LPENHLKNAKYLDVIERNSGA 381
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 293 PPVSVPENHSRYEKYVKEVDSGERA 219
PPV +PENH + KY+ ++ A
Sbjct: 358 PPV-LPENHLKNAKYLDVIERNSGA 381
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 293 PPVSVPENHSRYEKYVKEVDSGERA 219
PPV +PENH + KY+ ++ A
Sbjct: 358 PPV-LPENHLKNAKYLDVIERNSGA 381
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 8.6
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 225 FSAINLFYVLLVPAVILWYTYWRMSRRR 308
+S+++ FY+ + V L+Y ++ R R
Sbjct: 346 YSSLSSFYIPCIIMVFLYYNIFKALRNR 373
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,662
Number of Sequences: 438
Number of extensions: 7337
Number of successful extensions: 29
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 50242500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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