Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_G10_e175_14.seq
         (1501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   3.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   7.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 431 PLSPAGVIAKRPAPIALPNSCA 496
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/28 (28%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 165 GSLAFRASICSSVQYCILLGS-HXDVLL 85
           G  AF+  +C+S+ + +L+G  H  + +
Sbjct: 152 GIFAFQVLMCTSMNFVLLIGDLHTSIYI 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,091
Number of Sequences: 336
Number of extensions: 4425
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44964575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)