BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_G07_e151_13.seq (1506 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 6.8 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 9.1 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 9.1 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 23.0 bits (47), Expect = 6.8 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +1 Query: 205 ISKVNWRDSTRAACETSTQMR 267 +SK+ WR A E TQ+R Sbjct: 32 MSKIQWRKPKPAMVEEKTQLR 52 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 22.6 bits (46), Expect = 9.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +3 Query: 333 IEKFDATSLKHTETQEKNPLPD 398 IE + TSL T+ E PLP+ Sbjct: 653 IETMELTSLLLTKVAEDRPLPE 674 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 22.6 bits (46), Expect = 9.1 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 425 CLFRCDNIFVRQRVLLLGFCM 363 C+ R N R RVLL G C+ Sbjct: 32 CVSRISNRISRNRVLLRGQCI 52 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 306,357 Number of Sequences: 438 Number of extensions: 6072 Number of successful extensions: 43 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 43 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 52635000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -