Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_G04_e127_14.seq
(1506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 71 2e-12
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 63 4e-10
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 36 0.075
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 36 0.075
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 35 0.17
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 35 0.17
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 35 0.17
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 33 0.40
U58754-5|AAB00672.2| 330|Caenorhabditis elegans Serpentine rece... 30 4.9
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 29 6.5
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z75554-7|CAA99960.1| 297|Caenorhabditis elegans Hypothetical pr... 29 8.6
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 71.3 bits (167), Expect = 2e-12
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = -1
Query: 744 TKELY*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINS 565
T E Y + + N+ A Q L + GDVV ++M N E+V W+G+AK+ V+A INS
Sbjct: 135 TTETYAEFNAHCNRYANYFQG-LGYRSGDVVALYMENSVEFVAAWMGLAKIGVVTAWINS 193
Query: 564 NLRHKPLLHCIQVAKAKAIVYS 499
NL+ + L+HCI +K KAI+ S
Sbjct: 194 NLKREQLVHCITASKTKAIITS 215
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 63.3 bits (147), Expect = 4e-10
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = -1
Query: 732 Y*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINSNLRH 553
Y ++ + +NQ A + K GDVV +FM N ++ WLG++K+ VSA INSNL+
Sbjct: 110 YQELNALANQYANLYVSE-GYKMGDVVALFMENSIDFFAIWLGLSKIGVVSAFINSNLKL 168
Query: 552 KPLLHCIQVAKAKAIVYSDHL 490
+PL H I V+K K+ + + +L
Sbjct: 169 EPLAHSINVSKCKSCITNINL 189
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 35.9 bits (79), Expect = 0.075
Identities = 20/84 (23%), Positives = 45/84 (53%)
Frame = -1
Query: 732 Y*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINSNLRH 553
Y ++ ++ Q + V++ H +KRGDVV +++P E L A++ A+ +++ +
Sbjct: 119 YNELHAQVVQFSAVLRSH-GVKRGDVVALYLPMIPELAVAMLACARIGAMHSVVFAGFSA 177
Query: 552 KPLLHCIQVAKAKAIVYSDHLADG 481
+ L + A+ + +V +D + G
Sbjct: 178 ESLAARVVDARCRVLVTADGVFRG 201
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 35.9 bits (79), Expect = 0.075
Identities = 20/84 (23%), Positives = 45/84 (53%)
Frame = -1
Query: 732 Y*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINSNLRH 553
Y ++ ++ Q + V++ H +KRGDVV +++P E L A++ A+ +++ +
Sbjct: 129 YNELHAQVVQFSAVLRSH-GVKRGDVVALYLPMIPELAVAMLACARIGAMHSVVFAGFSA 187
Query: 552 KPLLHCIQVAKAKAIVYSDHLADG 481
+ L + A+ + +V +D + G
Sbjct: 188 ESLAARVVDARCRVLVTADGVFRG 211
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = -1
Query: 741 KELY*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINSN 562
++ Y Q+A+ + +A + HL LK+GD + ++ PN E+ T A V IN +
Sbjct: 48 RKTYSQVATDAENLACGLL-HLGLKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPS 106
Query: 561 LRHKPLLHCIQVAKAKAIV 505
+ + L + I+ +A++
Sbjct: 107 YQSEELRYAIEKVGIRALI 125
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = -1
Query: 741 KELY*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINSN 562
++ Y Q+A+ + +A + HL LK+GD + ++ PN E+ T A V IN +
Sbjct: 67 RKTYSQVATDAENLACGLL-HLGLKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPS 125
Query: 561 LRHKPLLHCIQVAKAKAIV 505
+ + L + I+ +A++
Sbjct: 126 YQSEELRYAIEKVGIRALI 144
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 34.7 bits (76), Expect = 0.17
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = -1
Query: 741 KELY*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALINSN 562
++ Y Q+A+ + +A + HL LK+GD + ++ PN E+ T A V IN +
Sbjct: 93 RKTYSQVATDAENLACGLL-HLGLKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPS 151
Query: 561 LRHKPLLHCIQVAKAKAIV 505
+ + L + I+ +A++
Sbjct: 152 YQSEELRYAIEKVGIRALI 170
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 33.5 bits (73), Expect = 0.40
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 732 Y*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGMAKLSAVSALIN 568
Y ++ S + A M H +K GD + + M N EYV LG L A+ LIN
Sbjct: 117 YEELVDGSKRTANYMSHH-GVKNGDRILMCMENTVEYVLYQLGGFLLGAIPVLIN 170
>U58754-5|AAB00672.2| 330|Caenorhabditis elegans Serpentine
receptor, class sx protein14 protein.
Length = 330
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 545 FYIAYKLLKRKRLFTPTIWLMVSLYIETRTMPAAAPAFHINFHYII*FLI-FLYGNLIIG 369
F + + + + T TIW++ + T P + FH+ +++I FL+ YG + +G
Sbjct: 87 FLVIFPYIFLYSMQTGTIWVLSVDLLITILYPIKSRNFHVPVYFVILFLLPVAYGAIFVG 146
Query: 368 TKF 360
F
Sbjct: 147 FGF 149
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 29.5 bits (63), Expect = 6.5
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -1
Query: 417 LYNIVFNFFIR*SNYRNEVL*RGLRVV*FSRNRHVTEYRMLCIYYILCVYSFIHVNSQFY 238
+Y IV F+I + +E R ++ + +H Y M+ IYY++ V + I V FY
Sbjct: 36 IYTIVLPFYICANKVNHE---RDKEILIYPITKHF--YHMVIIYYLIFVLTCISVFFCFY 90
Query: 237 RIYYACALI 211
++ + +I
Sbjct: 91 SLFSSLCII 99
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 780 IFINCHKRCKQITKELY*QMASKSNQVARVMQQHLDLKRGDVVCVFMPNCGEYVWTWLGM 601
+FI+ K K+LY + N +A + + L K GDV PNC E++ L +
Sbjct: 37 VFIDAETTTK---KKLYRDVEPTVNSLATALVK-LGFKPGDVAAQAFPNCPEFLIAMLAV 92
Query: 600 AK 595
K
Sbjct: 93 MK 94
>Z75554-7|CAA99960.1| 297|Caenorhabditis elegans Hypothetical
protein ZC455.9 protein.
Length = 297
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -2
Query: 488 LMVSLYIETRTMPAAAPAFHINFHYII*FLIFLYGNLIIGTKFFNAA 348
+ VS+Y + +P F FHY I F++ L + I+ T+FF AA
Sbjct: 60 IAVSIYYVALDISYLSPFFL--FHYKILFVVTLLSSNILSTRFFLAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,908,763
Number of Sequences: 27780
Number of extensions: 498315
Number of successful extensions: 1049
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4339584726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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