BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_G03_e119_13.seq (1507 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g52410.2 68418.m06502 expressed protein 30 4.6 At5g52410.1 68418.m06503 expressed protein 30 4.6 >At5g52410.2 68418.m06502 expressed protein Length = 761 Score = 29.9 bits (64), Expect = 4.6 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +2 Query: 176 EDEGK--LELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKKY 325 EDE + L L + + +E++A + K E RE A+ EEARG+ +KY Sbjct: 572 EDENQEILRLQNELEVERNALSIARDWAKDEARRAREQAKVLEEARGRWEKY 623 >At5g52410.1 68418.m06503 expressed protein Length = 510 Score = 29.9 bits (64), Expect = 4.6 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +2 Query: 176 EDEGK--LELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKKY 325 EDE + L L + + +E++A + K E RE A+ EEARG+ +KY Sbjct: 321 EDENQEILRLQNELEVERNALSIARDWAKDEARRAREQAKVLEEARGRWEKY 372 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,768,733 Number of Sequences: 28952 Number of extensions: 292722 Number of successful extensions: 529 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 529 length of database: 12,070,560 effective HSP length: 84 effective length of database: 9,638,592 effective search space used: 4019292864 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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