Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_G01_e103_13.seq
         (1451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    27   0.46 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.3  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   9.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 546 FFFFCYEMDFIVIIPYIKLHKVRARPLVCKGIET-LVLVNAFW 421
           FFFF    DFI +I    +H  R R +  K     LV+ NAF+
Sbjct: 75  FFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNIGLVVANAFF 117


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 680 PLSPAGVIAKRPAPIALPNSCA 745
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 242 RYILWTPERDS*RNQIPKFLILTGLFSGISLMDTIS 135
           R++ + PE     N   +FL  TG    ISL+D IS
Sbjct: 497 RFLFYKPEDIFRPNTYNRFLAATGGDHVISLIDEIS 532


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 686 SPAGVIAKRPAPIALPNSCA 745
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,297
Number of Sequences: 336
Number of extensions: 6154
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43325775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)