Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_G01_e103_13.seq
         (1451 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   1.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   2.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.1  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   5.5  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    24   9.5  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +2

Query: 386  SNSTPARSVSRYQNAFTNT 442
            SNSTP+RSV+R   +FT++
Sbjct: 1318 SNSTPSRSVARIVTSFTDS 1336


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 1277 GWXXFRXFLWVCXFSPTXKNXXWPGSL 1357
            G   FR +L VC F+P+ +    PGS+
Sbjct: 931  GHGYFREYLHVCGFAPSAECPRCPGSV 957


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 4.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 1161 PPPAYARQGXRGLXGMAGPFC 1223
            PP     +G +GL G+ GP C
Sbjct: 264  PPGMIGLKGDKGLAGLPGPSC 284


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 202 LRYESRSGVHNMYREYRDLSVG 267
           L  E+ +GVHN+Y+ +R+  +G
Sbjct: 153 LSEETTTGVHNLYKMFREGRLG 174


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 770 TICHSPFRLRNCWEGRSVRASSLLRQL 690
           T+C   F L  CW+    + +  LR++
Sbjct: 121 TLCDKAFWLHKCWKQSDPKVNMALRRI 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,320,588
Number of Sequences: 2352
Number of extensions: 27159
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 169060320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)