Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_G01_e103_13.seq
         (1451 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   226   5e-59
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   226   5e-59
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   226   5e-59

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  226 bits (553), Expect = 5e-59
 Identities = 105/135 (77%), Positives = 115/135 (85%)
 Frame = +1

Query: 82  SRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLS 261
           SRFWYFLRQLKKFKKTTGEIVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 42  SRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLT 101

Query: 262 VGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQY 441
           VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH SKI FPL +RVH  
Sbjct: 102 VGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHK 161

Query: 442 KRLNTFAYKRPSTYF 486
                F++++P TYF
Sbjct: 162 GNRKLFSFRKPRTYF 176


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  226 bits (553), Expect = 5e-59
 Identities = 105/135 (77%), Positives = 115/135 (85%)
 Frame = +1

Query: 82  SRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLS 261
           SRFWYFLRQLKKFKKTTGEIVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 42  SRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLT 101

Query: 262 VGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQY 441
           VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH SKI FPL +RVH  
Sbjct: 102 VGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHK 161

Query: 442 KRLNTFAYKRPSTYF 486
                F++++P TYF
Sbjct: 162 GNRKLFSFRKPRTYF 176


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  226 bits (553), Expect = 5e-59
 Identities = 105/135 (77%), Positives = 115/135 (85%)
 Frame = +1

Query: 82  SRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLS 261
           SRFWYFLRQLKKFKKTTGEIVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 42  SRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLT 101

Query: 262 VGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQY 441
           VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH SKI FPL +RVH  
Sbjct: 102 VGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHK 161

Query: 442 KRLNTFAYKRPSTYF 486
                F++++P TYF
Sbjct: 162 GNRKLFSFRKPRTYF 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,871,502
Number of Sequences: 53049
Number of extensions: 1143297
Number of successful extensions: 2292
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2291
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8026422120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)