BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_F10_e174_12.seq (1541 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g03080.1 68414.m00282 kinase interacting family protein simil... 30 3.5 >At1g03080.1 68414.m00282 kinase interacting family protein similar to kinase interacting protein 1 (GI:13936326) [Petunia integrifolia] Length = 1744 Score = 30.3 bits (65), Expect = 3.5 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = +1 Query: 679 IKRIDRDRVECCSSLEQESTIKERGLQRQKG 771 ++ + + VE C +LE ST+K+R +++ KG Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKG 1370 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,878,157 Number of Sequences: 28952 Number of extensions: 465367 Number of successful extensions: 967 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 967 length of database: 12,070,560 effective HSP length: 84 effective length of database: 9,638,592 effective search space used: 4134955968 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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