BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_F09_e166_11.seq
(1489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457390-1|CAG33671.1| 346|Homo sapiens omains 2; complete cds,... 35 0.88
BC008973-1|AAH08973.1| 374|Homo sapiens transmembrane protein w... 35 0.88
AY358907-1|AAQ89266.1| 374|Homo sapiens TenB2 protein. 35 0.88
AK074507-1|BAC11030.1| 374|Homo sapiens protein ( Homo sapiens ... 35 0.88
AF242222-1|AAG49452.1| 374|Homo sapiens TPEF protein. 35 0.88
AF179274-1|AAD55776.2| 374|Homo sapiens transmembrane protein T... 35 0.88
AC098617-1|AAX88893.1| 195|Homo sapiens unknown protein. 35 0.88
AB017269-1|BAA87897.1| 374|Homo sapiens TMEFF2 protein. 35 0.88
AB004064-1|BAA90820.1| 368|Homo sapiens tomoregulin protein. 35 0.88
AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein w... 34 1.2
L29216-1|AAA61481.1| 139|Homo sapiens clk2 protein. 34 1.5
BC014067-1|AAH14067.1| 498|Homo sapiens CDC-like kinase 2 protein. 31 8.2
AL713999-30|CAI95098.1| 498|Homo sapiens CDC-like kinase 2 prot... 31 8.2
AL713999-29|CAI95097.1| 497|Homo sapiens CDC-like kinase 2 prot... 31 8.2
>CR457390-1|CAG33671.1| 346|Homo sapiens omains 2; complete cds,
incl. stopcodon. protein.
Length = 346
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>BC008973-1|AAH08973.1| 374|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AY358907-1|AAQ89266.1| 374|Homo sapiens TenB2 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AK074507-1|BAC11030.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ90026 fis, clone HEMBA1001221, highly similar to
Transmembrane protein with EGF-like and two
follistatin-like ).
Length = 374
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AF242222-1|AAG49452.1| 374|Homo sapiens TPEF protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AF179274-1|AAD55776.2| 374|Homo sapiens transmembrane protein
TENB2 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AC098617-1|AAX88893.1| 195|Homo sapiens unknown protein.
Length = 195
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 3 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 48
>AB017269-1|BAA87897.1| 374|Homo sapiens TMEFF2 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AB004064-1|BAA90820.1| 368|Homo sapiens tomoregulin protein.
Length = 368
Score = 34.7 bits (76), Expect = 0.88
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
>AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 variant
protein.
Length = 374
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
C DC+ F P+CAS KS+ + C + +C+ ++ + G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVTSLGRC 227
>L29216-1|AAA61481.1| 139|Homo sapiens clk2 protein.
Length = 139
Score = 33.9 bits (74), Expect = 1.5
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
G +RRN ++R R A Y HSY Y R+ S R RR R SR +SR +
Sbjct: 75 GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 133
Query: 211 LSYVPP 194
+ + P
Sbjct: 134 MKSLAP 139
>BC014067-1|AAH14067.1| 498|Homo sapiens CDC-like kinase 2 protein.
Length = 498
Score = 31.5 bits (68), Expect = 8.2
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
G +RRN ++R R A Y HSY Y R+ S R RR R SR +SR +
Sbjct: 75 GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 133
Query: 211 LS 206
S
Sbjct: 134 HS 135
>AL713999-30|CAI95098.1| 498|Homo sapiens CDC-like kinase 2
protein.
Length = 498
Score = 31.5 bits (68), Expect = 8.2
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
G +RRN ++R R A Y HSY Y R+ S R RR R SR +SR +
Sbjct: 75 GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 133
Query: 211 LS 206
S
Sbjct: 134 HS 135
>AL713999-29|CAI95097.1| 497|Homo sapiens CDC-like kinase 2
protein.
Length = 497
Score = 31.5 bits (68), Expect = 8.2
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
G +RRN ++R R A Y HSY Y R+ S R RR R SR +SR +
Sbjct: 74 GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 132
Query: 211 LS 206
S
Sbjct: 133 HS 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,307,647
Number of Sequences: 237096
Number of extensions: 2261477
Number of successful extensions: 3541
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3513
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22033271868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -