SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_F09_e166_11.seq
         (1489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457390-1|CAG33671.1|  346|Homo sapiens omains 2; complete cds,...    35   0.88 
BC008973-1|AAH08973.1|  374|Homo sapiens transmembrane protein w...    35   0.88 
AY358907-1|AAQ89266.1|  374|Homo sapiens TenB2 protein.                35   0.88 
AK074507-1|BAC11030.1|  374|Homo sapiens protein ( Homo sapiens ...    35   0.88 
AF242222-1|AAG49452.1|  374|Homo sapiens TPEF protein.                 35   0.88 
AF179274-1|AAD55776.2|  374|Homo sapiens transmembrane protein T...    35   0.88 
AC098617-1|AAX88893.1|  195|Homo sapiens unknown protein.              35   0.88 
AB017269-1|BAA87897.1|  374|Homo sapiens TMEFF2 protein.               35   0.88 
AB004064-1|BAA90820.1|  368|Homo sapiens tomoregulin protein.          35   0.88 
AK222691-1|BAD96411.1|  374|Homo sapiens transmembrane protein w...    34   1.2  
L29216-1|AAA61481.1|  139|Homo sapiens clk2 protein.                   34   1.5  
BC014067-1|AAH14067.1|  498|Homo sapiens CDC-like kinase 2 protein.    31   8.2  
AL713999-30|CAI95098.1|  498|Homo sapiens CDC-like kinase 2 prot...    31   8.2  
AL713999-29|CAI95097.1|  497|Homo sapiens CDC-like kinase 2 prot...    31   8.2  

>CR457390-1|CAG33671.1|  346|Homo sapiens omains 2; complete cds,
           incl. stopcodon.   protein.
          Length = 346

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>BC008973-1|AAH08973.1|  374|Homo sapiens transmembrane protein with
           EGF-like and two follistatin-like domains 2 protein.
          Length = 374

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AY358907-1|AAQ89266.1|  374|Homo sapiens TenB2 protein.
          Length = 374

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AK074507-1|BAC11030.1|  374|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90026 fis, clone HEMBA1001221, highly similar to
           Transmembrane protein with EGF-like and two
           follistatin-like ).
          Length = 374

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AF242222-1|AAG49452.1|  374|Homo sapiens TPEF protein.
          Length = 374

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AF179274-1|AAD55776.2|  374|Homo sapiens transmembrane protein
           TENB2 protein.
          Length = 374

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AC098617-1|AAX88893.1|  195|Homo sapiens unknown protein.
          Length = 195

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 3   CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 48


>AB017269-1|BAA87897.1|  374|Homo sapiens TMEFF2 protein.
          Length = 374

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AB004064-1|BAA90820.1|  368|Homo sapiens tomoregulin protein.
          Length = 368

 Score = 34.7 bits (76), Expect = 0.88
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +  +  G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227


>AK222691-1|BAD96411.1|  374|Homo sapiens transmembrane protein with
           EGF-like and two follistatin-like domains 2 variant
           protein.
          Length = 374

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 214 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 363
           C  DC+   F P+CAS      KS+ + C +   +C+ ++ +     G C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVTSLGRC 227


>L29216-1|AAA61481.1|  139|Homo sapiens clk2 protein.
          Length = 139

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -1

Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
           G +RRN ++R R   A Y     HSY Y       R+  S R   RR  R SR +SR  +
Sbjct: 75  GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 133

Query: 211 LSYVPP 194
           +  + P
Sbjct: 134 MKSLAP 139


>BC014067-1|AAH14067.1|  498|Homo sapiens CDC-like kinase 2 protein.
          Length = 498

 Score = 31.5 bits (68), Expect = 8.2
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
           G +RRN ++R R   A Y     HSY Y       R+  S R   RR  R SR +SR  +
Sbjct: 75  GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 133

Query: 211 LS 206
            S
Sbjct: 134 HS 135


>AL713999-30|CAI95098.1|  498|Homo sapiens CDC-like kinase 2
           protein.
          Length = 498

 Score = 31.5 bits (68), Expect = 8.2
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
           G +RRN ++R R   A Y     HSY Y       R+  S R   RR  R SR +SR  +
Sbjct: 75  GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 133

Query: 211 LS 206
            S
Sbjct: 134 HS 135


>AL713999-29|CAI95097.1|  497|Homo sapiens CDC-like kinase 2
           protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 8.2
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 385 GEFRRNQHTRHRRLSAVYLCV--HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSREDT 212
           G +RRN ++R R   A Y     HSY Y       R+  S R   RR  R SR +SR  +
Sbjct: 74  GSYRRNDYSRDRG-DAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSS 132

Query: 211 LS 206
            S
Sbjct: 133 HS 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,307,647
Number of Sequences: 237096
Number of extensions: 2261477
Number of successful extensions: 3541
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3513
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22033271868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -