Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_F08_e158_12.seq
(1524 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 110 3e-24
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 109 4e-24
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 106 5e-23
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 101 1e-21
03_06_0479 + 34217170-34217172,34217337-34217786 100 3e-21
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 99 5e-21
05_01_0103 + 686770-687017,687120-687270 99 1e-20
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 97 3e-20
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 81 2e-15
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 60 6e-09
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 36 0.11
10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569 33 0.60
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 32 1.4
05_03_0038 + 7612866-7613132,7615691-7616608 28 1.8
11_06_0610 - 25449085-25453284 31 2.4
04_01_0107 - 1107976-1108033,1108411-1108638,1110109-1110422,111... 31 2.4
03_05_0954 - 29113938-29114024,29114277-29114444,29115156-291152... 31 2.4
08_02_1052 - 23962374-23963369 31 3.2
08_02_1049 + 23944526-23945473 31 3.2
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 31 3.2
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223... 30 4.2
11_01_0175 - 1398728-1399558 30 5.5
09_04_0377 + 17086775-17088310 30 5.5
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 29 7.3
08_02_1483 - 27451391-27451794,27451883-27452387 29 7.3
07_03_1257 - 25241194-25242018 29 9.7
02_05_0847 + 32183249-32183486,32184001-32184118,32184231-321843... 29 9.7
02_01_0302 - 2021221-2023305 29 9.7
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 110 bits (264), Expect = 3e-24
Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Frame = +1
Query: 142 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 318
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G YD F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 319 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 498
ECRY +FDF++ T E +K K+F +SW PDT++V+ KMLY+SS D K+ L G
Sbjct: 81 ADECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDG 135
Query: 499 VQKYIQATDLSEASQEAVEEK 561
+Q +QATD SE S + V+ +
Sbjct: 136 IQVELQATDPSEMSMDIVKSR 156
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 109 bits (263), Expect = 4e-24
Identities = 51/143 (35%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 142 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 318
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G R Y+ F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82
Query: 319 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 498
+CR+ ++DF++ T+E K ++F + W PD AKV+ KMLY+SS + KK L G
Sbjct: 83 --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNG 135
Query: 499 VQKYIQATDLSEASQEAVEEKLR 567
+Q +QATD E S +A++++++
Sbjct: 136 IQLEVQATDAGEISLDALKDRVK 158
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 106 bits (254), Expect = 5e-23
Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +1
Query: 142 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 318
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G +D F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES- 69
Query: 319 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 498
+CRY ++DF++ T E +K K+F ++W P ++++ KMLY++S + ++ L G
Sbjct: 70 --DCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDG 122
Query: 499 VQKYIQATDLSEASQEAVEEK 561
V IQATD SE E + E+
Sbjct: 123 VHYEIQATDPSELDIELLRER 143
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 101 bits (243), Expect = 1e-21
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Frame = +1
Query: 130 HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGGRNAEYDSFLEDL 306
H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G YD FL L
Sbjct: 7 HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASL 66
Query: 307 QKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKK 486
+ +CRY L+DF++ T E +K K+F ++W P T++++ KMLYS+S D +K+
Sbjct: 67 PEN---DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQ 118
Query: 487 SLVGVQKYIQATDLSEASQ 543
L G IQATD +E Q
Sbjct: 119 ELDGFHYEIQATDPTETPQ 137
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 100 bits (240), Expect = 3e-21
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Frame = +1
Query: 145 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGT 321
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +D L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 322 GECRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTAKVKKKMLYSSSFDALK 483
CRY ++D ++T T+ A + + K+F +SW P A V+ KM+Y+SS + K
Sbjct: 65 --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122
Query: 484 KSLVGVQKYIQATDLSEASQEAVEE 558
K L GVQ +QATD SE + + +++
Sbjct: 123 KELDGVQIDLQATDPSELTLDVLKD 147
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 99 bits (238), Expect = 5e-21
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 148 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDLQKGGTG 324
G+ V+D CK ++E+K + R++VF I D+ +I VE +G Y+ F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 325 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 504
ECRY ++D ++ T E +K K+F SW PDTA+ + KMLY+SS D ++ L G+Q
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQ 124
Query: 505 KYIQATDLSEASQEAVEEK 561
IQATD SE S + + +
Sbjct: 125 CEIQATDPSEMSLDIIRAR 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 98.7 bits (235), Expect = 1e-20
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = +1
Query: 151 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNAEYDSFLEDLQKGGTGE 327
+ V D CK + E+K + +R++++ I ++K+ + VE VG YD F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 328 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 507
CRY +FD+++ T E +K K+F ++W PDT++V+ KM+Y+SS D K+ L G+Q
Sbjct: 58 CRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQV 112
Query: 508 YIQATDLSEASQEAV 552
+QATD +E + +
Sbjct: 113 ELQATDPTEVGLDVI 127
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 97.1 bits (231), Expect = 3e-20
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +1
Query: 142 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 318
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G YD F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 319 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 498
ECRY +FDF++ T E +K K+F +SW PDT+KV+ KMLY+SS D K+ L G
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDG 380
Query: 499 VQ 504
+Q
Sbjct: 381 IQ 382
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 81.0 bits (191), Expect = 2e-15
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Frame = +1
Query: 151 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNAEYDSFLEDLQKGGTGE 327
+ V + K+ + E+K+ K HRYV+F I D ++ I VE G YD F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 328 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 507
CRY ++D ++ + + +K K+F +SW P ++++ K +Y+ S + + L GV
Sbjct: 77 CRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHF 131
Query: 508 YIQATDLSEASQEAVEEKLRAT 573
IQATD + E + + T
Sbjct: 132 EIQATDPDDMDLEVLRGRANRT 153
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 59.7 bits (138), Expect = 6e-09
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Frame = +1
Query: 151 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNAEYDSFLEDLQKGGTGE 327
+ V + K+ + E+ + K HRYV+F I D ++ I VE G YD F L +
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP----AD 95
Query: 328 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 507
Y L DF C +K K+F +SW P + ++ K +Y+ + + L GV
Sbjct: 96 AVYDL-DFVSDDNC-------RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHF 147
Query: 508 YIQATDLSEASQEAVEEKLRAT 573
IQATD + E + + T
Sbjct: 148 EIQATDPDDMDLEVLRGRANRT 169
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 576 PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAH-AQTDAAPRF 752
P P + PS P+ T + R PL T P + R PS++ + + AAPR
Sbjct: 124 PPTAPSPYSAPSPTPTPTHTQPRPSPPLLPTPATAADPANPNKARHPSSNKSSSPAAPRR 183
Query: 753 TSNGPAPPS 779
T++ +PP+
Sbjct: 184 TNSSSSPPN 192
>10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569
Length = 474
Score = 33.1 bits (72), Expect = 0.60
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 GEQETEIVPNVVVPRHRQGQEEDVVL*LL-RCAEEISRRRTEVHTGDRPLGGVAGGRRGE 560
G+++TEI R + EE+ +L L R +EE + RR D GG+AGGR G
Sbjct: 67 GDEQTEIKK-----RKEEAMEEEYLLGRLGRRSEERAARRARRPGQDGGAGGLAGGRLGG 121
Query: 561 TPR 569
PR
Sbjct: 122 LPR 124
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +2
Query: 569 PLTVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAPLXXXXXXXXXX 748
PL S + P++ P + RT + +P T SRP PP T AA
Sbjct: 426 PLLPSAVPLCTKPVSDPSSVLSRTGQMQPSATSSASRPRPPPTTTTAAAANGHLAASQPQ 485
Query: 749 VHFQRAGA 772
H +R A
Sbjct: 486 PHRRRPAA 493
>05_03_0038 + 7612866-7613132,7615691-7616608
Length = 394
Score = 28.3 bits (60), Expect(2) = 1.8
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 486 ISRRRTEVHTGDRPLGGVAGGRRGETPRH*PSV--NPMHLALPSTPPSHTRYERRVRGPL 659
++RR T H G G R+ +TP H P+V P+ + P P+ + +
Sbjct: 44 VARRSTHAHDGGGD--GEGSSRQPQTPPHQPNVPIGPLRIHTPERDPAQ-NWCNEIIAQF 100
Query: 660 SHTVVRDRRPPIH 698
TV DR +H
Sbjct: 101 YATVYFDRYRAMH 113
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 726 AQTDAAPRFTSNGP 767
A TD PR+T N P
Sbjct: 152 ANTDLLPRYTRNDP 165
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +3
Query: 555 GETPRH*PSVNPMHLALPSTPPSHTRY---ERRVRGPLSHTVVRDRRPPIHSNGRRPSAH 725
G TP S P + P P SHT E P + ++ PP HS + P +
Sbjct: 734 GHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSE 793
Query: 726 AQTDAAPRFTSNGPAP 773
A + P + P P
Sbjct: 794 AHPTSPPPSEKSPPTP 809
>04_01_0107 -
1107976-1108033,1108411-1108638,1110109-1110422,
1110568-1110680,1111740-1111845
Length = 272
Score = 31.1 bits (67), Expect = 2.4
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 498 RTEVHTGDRPLGGVAG-GRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVV 674
R + GDR G G GRR ++P SV+P++ + PS P + R V G + V
Sbjct: 192 RDDTERGDRYDGARGGYGRRDDSPYR-RSVSPVYRSRPS--PDYGRQRSPVYGSYDRSPV 248
Query: 675 RDR---RPPIHSNGRRPSAH 725
DR R P+ R P A+
Sbjct: 249 NDRYRSRSPVR-RSRSPLAN 267
>03_05_0954 -
29113938-29114024,29114277-29114444,29115156-29115212,
29115314-29115369,29115463-29115572,29116142-29116310,
29116418-29116742,29117378-29117442,29117541-29117712,
29118191-29118484
Length = 500
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 688 PQYTPTGGAPQLTLKQTPLLGSLPTGRRPPVHSSTGWCSLFTQQTFPFIGGPLSNTNSVF 867
P + P GGAP K T P + PP + LFT + P P ++VF
Sbjct: 216 PSWGPVGGAPVSQPKATAPAPKAPGAKAPPPPALPS-APLFTTEKSPKSAQPKEGMSAVF 274
Query: 868 KE 873
+E
Sbjct: 275 QE 276
>08_02_1052 - 23962374-23963369
Length = 331
Score = 30.7 bits (66), Expect = 3.2
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = +1
Query: 604 SPQLPPHTHATNDACAAPCHIPWFETAAPQYTPTGGAPQLTLKQTPLLGSLPTGRR 771
SP A + AAP W+ T A +Y P GA +LTL + L SL GRR
Sbjct: 81 SPSAAAEAAAVSGGPAAPSVASWWATTA-RYHP--GAARLTLGRQVLDASLSLGRR 133
>08_02_1049 + 23944526-23945473
Length = 315
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3
Query: 480 EEISRRRTEVHTGD-RPLGGVAGGRRGETPRH*PSVNPMHLALPSTPPSHTR--YER-RV 647
E I R T G R GG GG G PR P P A+ ST P R YE +
Sbjct: 158 EPIPRNNTRSINGILRDSGGGGGGFSGFAPRPPPQQPPPSFAMLSTAPPRKRVPYEAFQA 217
Query: 648 RGPLSHTVVRDRRPPI 695
+ ++ V + PP+
Sbjct: 218 KVAMADKVKEEEPPPV 233
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 30.7 bits (66), Expect = 3.2
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 636 ERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTSNGPAPPSSLFNGVVFPIYT 815
ER +RGP+ H V R P P + AAP PP +G P +
Sbjct: 1355 ERAIRGPMHHEVADRGRFPFPPGPPGPDHFEASSAAPVHYGRPSDPPPGPCSGWSMPPRS 1414
Query: 816 TNVSVYR 836
+N S R
Sbjct: 1415 SNYSPSR 1421
>04_04_1275 +
32321161-32321285,32321849-32322071,32322187-32322309,
32322391-32322519,32322939-32323024,32323233-32323356,
32323531-32323579,32323808-32323890,32323975-32324042,
32324187-32324264,32324460-32324547,32324640-32324756,
32324844-32325176
Length = 541
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 622 HTHATNDACAAPCHIPWFETAAPQYTPTGGAPQLTLKQTP 741
HT+ TN +C+ PC P + P Y + Q+ + Q P
Sbjct: 46 HTNGTNGSCSKPCE-PLTDYCIPDYILNPDSEQVLVDQAP 84
>11_01_0175 - 1398728-1399558
Length = 276
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 617 PLTHTLRTTRARPL-VTYRGSRPPPPNT 697
PL H T PL ++RG+RPP P T
Sbjct: 19 PLEHAAAATETTPLHPSFRGARPPSPGT 46
>09_04_0377 + 17086775-17088310
Length = 511
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 579 SVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRR 713
S +P PS PS R RR R P + RDR P + + RR
Sbjct: 23 SPSPRRRRSPSRSPSPRRNRRRDRSPSPYRSRRDRSPSPYRDRRR 67
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 29.5 bits (63), Expect = 7.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 345 EETISAFSGAALLQVFEKAIVFGITSADGFDVD 247
+ET+ A ++FEK +V I+S DG+D +
Sbjct: 541 QETVDAVHSEICGKLFEKVVVEAISSVDGYDTN 573
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 525 PLGGVAGGRRGETPRH*PSVNPMHLALPSTPPS 623
PLGG GGR G H P VNP A PS
Sbjct: 5 PLGG-GGGRHGRDDHHRPPVNPTDSAAAFLYPS 36
>07_03_1257 - 25241194-25242018
Length = 274
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +3
Query: 609 STPPSHTRYERRVRGPLSHTVVRDRRPP--IHSNGRRPSAHAQTDAAPRFTSNGPAPPS 779
STP + R R L+ T RRPP +HS R P P+ P P+
Sbjct: 61 STPSPASMTPSRCRTTLASTTTTRRRPPRRLHSRPRHPRGRTTASTTPQPPRPLPRQPT 119
>02_05_0847 +
32183249-32183486,32184001-32184118,32184231-32184376,
32184591-32186080
Length = 663
Score = 29.1 bits (62), Expect = 9.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 362 CVYSKSKRPYLHSPVPPFCRSSRKLSYSALRP 267
CV S S P LHSP CR+ +++ + ++P
Sbjct: 615 CVRSTSVEPCLHSPPILSCRAKKEVDAATVKP 646
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.1 bits (62), Expect = 9.7
Identities = 24/90 (26%), Positives = 33/90 (36%)
Frame = +3
Query: 576 PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFT 755
PS + P+ P S+T P S T PP S+ PS + P T
Sbjct: 424 PSYPSPSSSYPAPPGSNT--PSYPSPPSSATTPSSHSPPGGSSSTTPSYPSPNGGKPS-T 480
Query: 756 SNGPAPPSSLFNGVVFPIYTTNVSVYRGPP 845
+ P+PP S P ++ Y PP
Sbjct: 481 PSHPSPPGSTTPSYPSPPSSSTTPSYHSPP 510
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,930,180
Number of Sequences: 37544
Number of extensions: 695634
Number of successful extensions: 2451
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2426
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4896089576
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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