BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_F04_e126_12.seq (1448 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 1.2 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 1.2 AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 1.2 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 25.4 bits (53), Expect = 1.2 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = -2 Query: 289 SLKDSEEQTSPPATPGSRGVH 227 S+K + E PP PG G H Sbjct: 324 SMKTARENPGPPGVPGDHGDH 344 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 25.4 bits (53), Expect = 1.2 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = -2 Query: 289 SLKDSEEQTSPPATPGSRGVH 227 S+K + E PP PG G H Sbjct: 324 SMKTARENPGPPGVPGDHGDH 344 >AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit protein. Length = 365 Score = 25.4 bits (53), Expect = 1.2 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = -2 Query: 289 SLKDSEEQTSPPATPGSRGVH 227 S+K + E PP PG G H Sbjct: 263 SMKTARENPGPPGVPGDHGDH 283 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,173 Number of Sequences: 438 Number of extensions: 2140 Number of successful extensions: 17 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 50362125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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