Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_F03_e118_11.seq
         (1546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   3.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   3.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   3.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   3.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 250 SSLHLIFILVFDNKSTLQLVDNISL 324
           S++  I  L+ D+K T+++ DNIS+
Sbjct: 883 STIANIMDLLMDSKRTIEINDNISM 907


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 250 SSLHLIFILVFDNKSTLQLVDNISL 324
           S++  I  L+ D+K T+++ DNIS+
Sbjct: 883 STIANIMDLLMDSKRTIEINDNISM 907


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 250 SSLHLIFILVFDNKSTLQLVDNISL 324
           S++  I  L+ D+K T+++ DNIS+
Sbjct: 883 STIANIMDLLMDSKRTIEINDNISM 907


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 250 SSLHLIFILVFDNKSTLQLVDNISL 324
           S++  I  L+ D+K T+++ DNIS+
Sbjct: 883 STIANIMDLLMDSKRTIEINDNISM 907


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 468 NILKRIINTI--YIDYFDNFYFLYTVSILFSLIICLWVYTIFVSLLRV 605
           N   R++  I   I+  + FY ++T+ ILFS ++ L V T +  L+ V
Sbjct: 247 NEFMRLVEEIEDVIEAINGFYGVHTLLILFSCLLHL-VVTPYYLLIEV 293


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 507 YFDNFYFLYTVSILFSLIICLWVYTIFVSL 596
           YF   + ++TV +LF L I  +V  +F  L
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,103
Number of Sequences: 336
Number of extensions: 4741
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46500950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)