Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_F03_e118_11.seq
         (1546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   3.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   3.4  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    25   7.7  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    25   7.7  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 29  LXXTSGIPRAAGNSARGQNLADVLLDKIRELXAEL*KH 142
           L  TSG PRAAG+S+  +  +  L  +  EL A++ KH
Sbjct: 62  LPTTSGEPRAAGSSSNSRRNSKQL--QRDELAAKMGKH 97


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 29  LXXTSGIPRAAGNSARGQNLADVLLDKIRELXAEL*KH 142
           L  TSG PRAAG+S+  +  +  L  +  EL A++ KH
Sbjct: 62  LPTTSGEPRAAGSSSNSRRNSKQL--QRDELAAKMGKH 97


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 516 NFYFLYTVSILFSLIICLWV 575
           N Y L  VS  F L++CLW+
Sbjct: 31  NLYIL-GVSFFFPLVLCLWL 49


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 516 NFYFLYTVSILFSLIICLWV 575
           N Y L  VS  F L++CLW+
Sbjct: 445 NLYIL-GVSFFFPLVLCLWL 463


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,066,525
Number of Sequences: 2352
Number of extensions: 18670
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 181658565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)