Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_F03_e118_11.seq
         (1546 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101175-1|AAI01176.1|  361|Homo sapiens GPR120 protein protein.       32   4.9  
AY288417-1|AAP72126.1|  376|Homo sapiens G protein-coupled recep...    32   4.9  
AY255573-1|AAO85085.1|  248|Homo sapiens G protein-coupled recep...    32   4.9  
AL356214-4|CAH72327.1|  361|Homo sapiens G protein-coupled recep...    32   4.9  
AL356214-3|CAH72326.1|  377|Homo sapiens G protein-coupled recep...    32   4.9  
AB115768-1|BAD83368.1|  377|Homo sapiens G-protein-coupled recep...    32   4.9  

>BC101175-1|AAI01176.1|  361|Homo sapiens GPR120 protein protein.
          Length = 361

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +2

Query: 683 IYIYIIVLAHHYSIRTRXXXXXXXXICRLHIKNETXGKHRKAGVYTRLVHXGVKGSXXLQ 862
           +  Y++ L+   +I T         +C +H++    G  R+A      +  G      L 
Sbjct: 113 LLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALP 172

Query: 863 LTYFYRVLPNIL 898
           L  F+RV+P  L
Sbjct: 173 LCVFFRVVPQRL 184


>AY288417-1|AAP72126.1|  376|Homo sapiens G protein-coupled receptor
           120 protein.
          Length = 376

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +2

Query: 683 IYIYIIVLAHHYSIRTRXXXXXXXXICRLHIKNETXGKHRKAGVYTRLVHXGVKGSXXLQ 862
           +  Y++ L+   +I T         +C +H++    G  R+A      +  G      L 
Sbjct: 112 LLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALP 171

Query: 863 LTYFYRVLPNIL 898
           L  F+RV+P  L
Sbjct: 172 LCVFFRVVPQRL 183


>AY255573-1|AAO85085.1|  248|Homo sapiens G protein-coupled receptor
           PGR4 protein.
          Length = 248

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +2

Query: 683 IYIYIIVLAHHYSIRTRXXXXXXXXICRLHIKNETXGKHRKAGVYTRLVHXGVKGSXXLQ 862
           +  Y++ L+   +I T         +C +H++    G  R+A      +  G      L 
Sbjct: 65  LLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALP 124

Query: 863 LTYFYRVLPNIL 898
           L  F+RV+P  L
Sbjct: 125 LCVFFRVVPQRL 136


>AL356214-4|CAH72327.1|  361|Homo sapiens G protein-coupled receptor
           120 protein.
          Length = 361

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +2

Query: 683 IYIYIIVLAHHYSIRTRXXXXXXXXICRLHIKNETXGKHRKAGVYTRLVHXGVKGSXXLQ 862
           +  Y++ L+   +I T         +C +H++    G  R+A      +  G      L 
Sbjct: 113 LLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALP 172

Query: 863 LTYFYRVLPNIL 898
           L  F+RV+P  L
Sbjct: 173 LCVFFRVVPQRL 184


>AL356214-3|CAH72326.1|  377|Homo sapiens G protein-coupled receptor
           120 protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +2

Query: 683 IYIYIIVLAHHYSIRTRXXXXXXXXICRLHIKNETXGKHRKAGVYTRLVHXGVKGSXXLQ 862
           +  Y++ L+   +I T         +C +H++    G  R+A      +  G      L 
Sbjct: 113 LLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALP 172

Query: 863 LTYFYRVLPNIL 898
           L  F+RV+P  L
Sbjct: 173 LCVFFRVVPQRL 184


>AB115768-1|BAD83368.1|  377|Homo sapiens G-protein-coupled receptor
           GT01 protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/72 (23%), Positives = 30/72 (41%)
 Frame = +2

Query: 683 IYIYIIVLAHHYSIRTRXXXXXXXXICRLHIKNETXGKHRKAGVYTRLVHXGVKGSXXLQ 862
           +  Y++ L+   +I T         +C +H++    G  R+A      +  G      L 
Sbjct: 113 LLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYSAVAALP 172

Query: 863 LTYFYRVLPNIL 898
           L  F+RV+P  L
Sbjct: 173 LCVFFRVVPQRL 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,479,089
Number of Sequences: 237096
Number of extensions: 2688306
Number of successful extensions: 2915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2915
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23074645414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)