Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_F01_e102_11.seq
(1492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063405-1|AAH63405.1| 137|Homo sapiens bolA homolog 1 (E. coli... 107 1e-22
AL591493-19|CAI12571.1| 137|Homo sapiens bolA homolog 1 (E. col... 107 1e-22
AF151901-1|AAD34138.1| 137|Homo sapiens CGI-143 protein protein. 107 1e-22
AF060511-1|AAG43129.1| 86|Homo sapiens My016 protein protein. 58 1e-07
BC130403-1|AAI30404.1| 124|Homo sapiens bolA homolog 2 (E. coli... 38 0.071
BC130401-1|AAI30402.1| 124|Homo sapiens bolA homolog 2 (E. coli... 38 0.071
BC062756-1|AAH62756.1| 58|Homo sapiens BOLA2 protein protein. 38 0.071
DQ225187-1|ABB04094.1| 107|Homo sapiens bolA-like 3 protein. 35 0.67
AC073263-3|AAX93059.1| 107|Homo sapiens unknown protein. 35 0.67
>BC063405-1|AAH63405.1| 137|Homo sapiens bolA homolog 1 (E. coli)
protein.
Length = 137
Score = 107 bits (257), Expect = 1e-22
Identities = 54/105 (51%), Positives = 75/105 (71%)
Frame = +2
Query: 239 SSISGVVENTMRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKR 418
S G VE +R KL+++L+ + LE+ NES H VP G+ETHF+V VVS +F+GLS ++R
Sbjct: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85
Query: 419 HRLVNDLLKEELQTGVHALSIVAKTPKQWEESDKVVESSPNCRGG 553
HRLV+ L EEL VHAL+I A+TP QW E+ + +++SP C GG
Sbjct: 86 HRLVHAALAEELGGPVHALAIQARTPAQWRENSQ-LDTSPPCLGG 129
>AL591493-19|CAI12571.1| 137|Homo sapiens bolA homolog 1 (E. coli)
protein.
Length = 137
Score = 107 bits (257), Expect = 1e-22
Identities = 54/105 (51%), Positives = 75/105 (71%)
Frame = +2
Query: 239 SSISGVVENTMRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKR 418
S G VE +R KL+++L+ + LE+ NES H VP G+ETHF+V VVS +F+GLS ++R
Sbjct: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85
Query: 419 HRLVNDLLKEELQTGVHALSIVAKTPKQWEESDKVVESSPNCRGG 553
HRLV+ L EEL VHAL+I A+TP QW E+ + +++SP C GG
Sbjct: 86 HRLVHAALAEELGGPVHALAIQARTPAQWRENSQ-LDTSPPCLGG 129
>AF151901-1|AAD34138.1| 137|Homo sapiens CGI-143 protein protein.
Length = 137
Score = 107 bits (257), Expect = 1e-22
Identities = 54/105 (51%), Positives = 75/105 (71%)
Frame = +2
Query: 239 SSISGVVENTMRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKR 418
S G VE +R KL+++L+ + LE+ NES H VP G+ETHF+V VVS +F+GLS ++R
Sbjct: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85
Query: 419 HRLVNDLLKEELQTGVHALSIVAKTPKQWEESDKVVESSPNCRGG 553
HRLV+ L EEL VHAL+I A+TP QW E+ + +++SP C GG
Sbjct: 86 HRLVHAALAEELGGPVHALAIQARTPAQWRENSQ-LDTSPPCLGG 129
>AF060511-1|AAG43129.1| 86|Homo sapiens My016 protein protein.
Length = 86
Score = 57.6 bits (133), Expect = 1e-07
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = +2
Query: 269 MRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKRHRLVNDLLKE 448
+R KLQ+ L +H+E+ + + F+V+VVS KF+G L++RHRLVN L E
Sbjct: 8 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRLVNACLAE 62
Query: 449 ELQTGVHALSIVAKTPKQW 505
EL +HA TP QW
Sbjct: 63 EL-PHIHAFEQKTLTPDQW 80
>BC130403-1|AAI30404.1| 124|Homo sapiens bolA homolog 2 (E. coli)
protein.
Length = 124
Score = 38.3 bits (85), Expect = 0.071
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 269 MRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKRHRLVND 436
+R KLQ+ L +H+E+ + + F+V+VVS KF+G L++RHR +
Sbjct: 74 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 124
>BC130401-1|AAI30402.1| 124|Homo sapiens bolA homolog 2 (E. coli)
protein.
Length = 124
Score = 38.3 bits (85), Expect = 0.071
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 269 MRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKRHRLVND 436
+R KLQ+ L +H+E+ + + F+V+VVS KF+G L++RHR +
Sbjct: 74 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 124
>BC062756-1|AAH62756.1| 58|Homo sapiens BOLA2 protein protein.
Length = 58
Score = 38.3 bits (85), Expect = 0.071
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 269 MRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKRHRLVND 436
+R KLQ+ L +H+E+ + + F+V+VVS KF+G L++RHR +
Sbjct: 8 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 58
>DQ225187-1|ABB04094.1| 107|Homo sapiens bolA-like 3 protein.
Length = 107
Score = 35.1 bits (77), Expect = 0.67
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +2
Query: 338 NVPKGAETHFKVIVVSDKFDGLSLIKRHRLVNDLLKEELQTGVHALSIVAKTPKQ 502
++ G +++ + S++F +++H++VN LKEE++ +H L I PK+
Sbjct: 54 DISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKE-MHGLRIFTSVPKR 107
>AC073263-3|AAX93059.1| 107|Homo sapiens unknown protein.
Length = 107
Score = 35.1 bits (77), Expect = 0.67
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +2
Query: 338 NVPKGAETHFKVIVVSDKFDGLSLIKRHRLVNDLLKEELQTGVHALSIVAKTPKQ 502
++ G +++ + S++F +++H++VN LKEE++ +H L I PK+
Sbjct: 54 DISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKE-MHGLRIFTSVPKR 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,612,802
Number of Sequences: 237096
Number of extensions: 3419326
Number of successful extensions: 9507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9503
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22088081002
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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