Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_F01_e102_11.seq
         (1492 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023619-1|AAY85019.1|  140|Drosophila melanogaster IP05796p pro...   116   6e-26
AE014297-3592|AAF56322.1|  115|Drosophila melanogaster CG31126-P...   114   3e-25
AE013599-1545|AAM68636.1|   86|Drosophila melanogaster CG33672-P...    58   4e-08

>BT023619-1|AAY85019.1|  140|Drosophila melanogaster IP05796p
           protein.
          Length = 140

 Score =  116 bits (280), Expect = 6e-26
 Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 7/123 (5%)
 Frame = +2

Query: 212 QILPLQRSMSSISGV---VENTMRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVV 382
           QILP + +MS  +G    +E+ MR  L   L   +LE+INES  HNVPK +E+HF+V VV
Sbjct: 19  QILP-RATMSQEAGQYPPIESAMRKALNTELKPVYLEVINESPQHNVPKRSESHFRVFVV 77

Query: 383 SDKFDGLSLIKRHRLVNDLLKEELQTG----VHALSIVAKTPKQWEESDKVVESSPNCRG 550
           S+KF+ L+LIKRHRLVND +K  L+      +HALSI AKTPKQW E ++  E SP C G
Sbjct: 78  SEKFNDLTLIKRHRLVNDTVKNALKEAGFEFMHALSIEAKTPKQW-EPEQEPEKSPPCLG 136

Query: 551 GFG 559
           G G
Sbjct: 137 GHG 139


>AE014297-3592|AAF56322.1|  115|Drosophila melanogaster CG31126-PA
           protein.
          Length = 115

 Score =  114 bits (274), Expect = 3e-25
 Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
 Frame = +2

Query: 257 VENTMRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKRHRLVND 436
           +E+ MR  L   L   +LE+INES  HNVPK +E+HF+V VVS+KF+ L+LIKRHRLVND
Sbjct: 11  IESAMRKALNTELKPVYLEVINESPQHNVPKRSESHFRVFVVSEKFNDLTLIKRHRLVND 70

Query: 437 LLKEELQTG----VHALSIVAKTPKQWEESDKVVESSPNCRGGFG 559
            +K  L+      +HALSI AKTPKQW E ++  E SP C GG G
Sbjct: 71  TVKNALKEAGFEFMHALSIEAKTPKQW-EPEQEPEKSPPCLGGHG 114


>AE013599-1545|AAM68636.1|   86|Drosophila melanogaster CG33672-PA,
           isoform A protein.
          Length = 86

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/81 (35%), Positives = 49/81 (60%)
 Frame = +2

Query: 269 MRNKLQKSLNTKHLEIINESYMHNVPKGAETHFKVIVVSDKFDGLSLIKRHRLVNDLLKE 448
           +  KL++ L T+++ + +ES       G    F  ++VS  F G +L+++HRLVN  L E
Sbjct: 9   LEEKLKRELQTEYVSVTDES------DGCGGKFSAVIVSPAFSGKTLLQKHRLVNSTLAE 62

Query: 449 ELQTGVHALSIVAKTPKQWEE 511
           EL+  +HA S  + TP++WE+
Sbjct: 63  ELKE-IHAFSQKSYTPEEWEK 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,043,093
Number of Sequences: 53049
Number of extensions: 925943
Number of successful extensions: 1585
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8290582848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)