Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_E10_e173_10.seq
         (1489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   1.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   2.9  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   5.1  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    23   5.1  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
 Frame = -3

Query: 314 DSLNTRGGTLD--DVATVVALASHQPEPXXXXXXXXXXXFQTLVFLHCFLSLSPPSVPIS 141
           DS+  +  TL   D +  + + SH  +               ++     L L P    + 
Sbjct: 327 DSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVH 386

Query: 140 NSAGEQETRGQSSDTGVVRH 81
           + +GE  +RG S  +    H
Sbjct: 387 SDSGENNSRGHSGQSSSHHH 406


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 159 RRQAEETVKKDESLEQELCKDKDAGEWFRLVAGEGDNCR 275
           R Q   T+K+ ++ E++  +    G++F   A +GD+ R
Sbjct: 262 RGQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGDDLR 300


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 883 SSLCVIECTAISCPXLCVSCTAE*LVYLCDIKNV 782
           S LCVI C  +    + + C+ +    L D+K++
Sbjct: 7   SLLCVIYCALVHADTVAILCSQKAGFDLSDLKSM 40


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 883 SSLCVIECTAISCPXLCVSCTAE*LVYLCDIKNV 782
           S LCVI C  +    + + C+ +    L D+K++
Sbjct: 7   SLLCVIYCALVHADTVAILCSQKAGFDLSDLKSM 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,730
Number of Sequences: 438
Number of extensions: 7024
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 51917250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)