Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_E09_e165_09.seq
(1463 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179... 43 5e-04
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 42 0.002
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 41 0.003
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 39 0.009
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 39 0.011
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133... 38 0.026
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067... 37 0.035
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 36 0.080
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580... 36 0.080
10_08_0948 + 21754985-21755290,21756042-21756297,21756845-217569... 35 0.19
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 35 0.19
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 33 0.43
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 32 1.3
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 32 1.3
02_01_0703 + 5251901-5251950,5252783-5253554 31 2.3
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 30 5.3
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 30 5.3
>02_05_1263 +
35316083-35316185,35317167-35317220,35317665-35317903,
35317989-35318089,35318390-35318583,35318885-35319003,
35319624-35319749,35320081-35320142,35320265-35320348,
35320580-35320664
Length = 388
Score = 43.2 bits (97), Expect = 5e-04
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKIFSNQA--PQSTERIVQLVGKPDSIIAGIREVLD 417
AGC+IGK G+ I E + ++GAR+++ + P + +RI+ + G D +I + +L+
Sbjct: 70 AGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELILE 127
Score = 32.3 bits (70), Expect = 0.99
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIF--SNQAPQSTERIVQLVGKPDSIIA 396
G V+G+AG I E+ + +GAR+KI + ++ER V + G ++I A
Sbjct: 297 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQA 346
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSN-QAPQSTER---IVQLVGKPDSI 390
GC++GK G+ I E+R+ TGA ++IF N Q P+ +R +VQ+ G SI
Sbjct: 340 GCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSI 389
Score = 37.5 bits (83), Expect = 0.026
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSN--QAPQSTERIVQLVGKPDSIIAGIREVLDL 420
+ GCV+GK G ++ +R+++GA++++F N Q P + +L+ + A +R+ L L
Sbjct: 119 QVGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSA-VRKALLL 177
Query: 421 CXT 429
T
Sbjct: 178 VTT 180
Score = 33.5 bits (73), Expect = 0.43
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G+ I+ L+ +TGA +KI + S ER++ + +S
Sbjct: 256 GSIIGKGGSTIRALQSETGASIKIIEPNS-DSEERVIVISAHENS 299
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 40.7 bits (91), Expect = 0.003
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSN-QAPQ---STERIVQLVGKPDSIIAGIREV 411
++ GC+IG+ G I E+R +TGA ++++S P+ E +VQ+ G P + E+
Sbjct: 394 NKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEI 453
Query: 412 LDLCXTXYXSRGLXXN 459
T G N
Sbjct: 454 ASRLRTRTLRDGSSSN 469
Score = 38.3 bits (85), Expect = 0.015
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIA 396
VIG G + E+R+ +GAR+K+ P S+E IV++ G PD + A
Sbjct: 697 VIGAGGVNLAEIRQISGARVKLHEAH-PGSSESIVEIQGIPDQVKA 741
Score = 37.5 bits (83), Expect = 0.026
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIF-SNQAPQ---STERIVQLVGKPDSIIAGIREV 411
++ GC++GK G+ I++LR TGA +++ S PQ ++ +VQ+ G + + E+
Sbjct: 171 NQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEI 230
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGK--PDSIIAGIREVLDL 420
G VIGK+G ++++ ++TGA +++ S ER++ + + PD ++ E L L
Sbjct: 314 GQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALIL 371
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 39.1 bits (87), Expect = 0.009
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQS---TERIVQLVGKPDSIIA 396
++ G +IGK G IK L+ ++GAR+++ P+ TER V++ G I A
Sbjct: 255 NKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEA 308
Score = 32.3 bits (70), Expect = 0.99
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQST--ERIVQLVGKPDSI 390
++ G +IGK+G I+ L+ +GA+++I + + R V+LVG +SI
Sbjct: 161 NKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESI 211
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 38.7 bits (86), Expect = 0.011
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFS--NQAPQSTERIVQLVGKPDSI 390
R G +IGK+G IK L+ ++GA++++ + P S R V+L G PD I
Sbjct: 174 RVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQI 223
Score = 37.1 bits (82), Expect = 0.035
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAP---QSTERIVQLVGKPDSIIAGIREVL 414
++ G VIGK G IK ++ K+GAR+++ P +TER V + G + I + V+
Sbjct: 267 NKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIETAKQLVI 326
Query: 415 DL 420
++
Sbjct: 327 EV 328
>02_01_0198 +
1334563-1334994,1335872-1335919,1336096-1336351,
1336733-1336881,1336969-1337097,1337425-1337592,
1338416-1338610
Length = 458
Score = 37.5 bits (83), Expect = 0.026
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQS----TERIVQLVGKPDSIIAGIREV 411
++A +IGK G +IK ++E TGA +KI S ERIV + G P ++ ++ V
Sbjct: 216 AQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSV 275
Query: 412 LDLCXTXYXSRGL 450
L + G+
Sbjct: 276 LGVLRKFLVDHGV 288
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIV 363
+ G +IG+ G IK L E T AR+++ A + RIV
Sbjct: 107 KVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIV 145
>03_03_0131 -
14706123-14706171,14706364-14706422,14706504-14706770,
14706857-14707114,14707207-14707629,14707942-14708514
Length = 542
Score = 37.1 bits (82), Expect = 0.035
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 202 STIKIWTSVY*YIMSRAGCVIGKAGAKIKELREKTGARLKIFSNQ-APQ---STERIVQL 369
S I +T+ SR GC+IGK G+ I E+R + A ++I S + P+ E +VQ+
Sbjct: 360 SAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQI 419
Query: 370 VGKPDSIIAGIREVLDLCXTXYXSR-GLXXNYDP 468
G D + + ++ + R G + P
Sbjct: 420 SGDLDVVRHALLQITTRLKANFFEREGALSGFPP 453
Score = 35.1 bits (77), Expect = 0.14
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ 336
GC+IGK G I+ +R TGA +++ SN+
Sbjct: 150 GCIIGKGGHIIQGIRSDTGAHIRVLSNE 177
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 35.9 bits (79), Expect = 0.080
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFS 330
++ GC++G+ G I E+R +TGA ++++S
Sbjct: 604 NKVGCILGEGGKVITEMRRRTGAEIRVYS 632
>08_01_0673 -
5805218-5805349,5805936-5806026,5806416-5806471,
5806571-5806852,5806924-5807057,5807088-5807163,
5807247-5807747,5808454-5809037,5809579-5809597
Length = 624
Score = 35.9 bits (79), Expect = 0.080
Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQ---STERIVQLVGKPDSI 390
GC+IGK G+ + ++R KT A + I + P+ S++ +V++ G+ +++
Sbjct: 398 GCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENL 446
Score = 32.7 bits (71), Expect = 0.75
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKI--FSNQAPQSTERIVQLVGKPDSIIAGIREVL 414
+ G VIGK G IK +R+++GAR+ + N +S I D+ A + VL
Sbjct: 325 KIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDAKSAAVEAVL 382
>10_08_0948 +
21754985-21755290,21756042-21756297,21756845-21756999,
21757077-21757349,21757582-21757776,21757867-21758058
Length = 458
Score = 34.7 bits (76), Expect = 0.19
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFS---NQAP---QSTERIVQLVGKPDSIIAGIREV 411
+IGK GA IK ++E TGA +++ S + P ERIV++ G+ + ++ ++ V
Sbjct: 163 LIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAV 219
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 34.7 bits (76), Expect = 0.19
Identities = 16/60 (26%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFS-NQAPQ---STERIVQLVGKPDSIIAGIREV 411
++ GC++GK G+ I E+R+ +GA + + S ++ P+ + +VQ+ G ++I + ++
Sbjct: 507 NQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQI 566
Score = 33.1 bits (72), Expect = 0.57
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIV 363
S++G VIGK G I ++R++TG ++++ P ER++
Sbjct: 97 SKSGNVIGKGGGIIAKIRQETGVKIRV-DEVVPGCDERVI 135
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 33.5 bits (73), Expect = 0.43
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
S AG +IGK G K + TGA+L I N++ + + I +L G D I
Sbjct: 490 SLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNI-ELEGTFDQI 537
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIF--SNQAPQS---TERIVQLVGKPDSIIAGIREVLD 417
GC++GK G I+++R +T ++I P+ +E +VQ+VG+ + + + + D
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 418 -LCXTXYXSRG 447
L + + RG
Sbjct: 259 RLKESLHRDRG 269
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGK--PDSIIA 396
+ G +IG+ G IK++ E++ AR+KI P ER V + K PD+ I+
Sbjct: 118 KVGAIIGRKGEFIKKMCEESKARIKILDG-PPGVPERTVMISAKDEPDAPIS 168
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 241 MSRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
+S A VIG AGA I +R +GA + I ++ E V+++G +
Sbjct: 400 LSYADAVIGAAGASISYIRRHSGATVTIQESRGAPG-EMTVEIIGSASQV 448
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
S AG +IG+ G K++ TGA+L I +++ + + I +L G D I
Sbjct: 153 SLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNI-ELEGTFDQI 200
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPD 384
+ G VIG+ G IK++ E++ AR+K+ P +R V + K +
Sbjct: 125 KVGAVIGRKGEFIKKMCEESRARIKVLDG-PPGVPDRAVMISAKDE 169
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 29.9 bits (64), Expect = 5.3
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 6 PRAAGIXTRGTNISKLRSQYKASITVP----DCPGPERVLSILTE 128
PR A + T + L KAS+TVP DCP +RVL + E
Sbjct: 48 PRRAALLTARASAEPLEVCAKASLTVPDRLGDCPFTQRVLLTIEE 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,744,221
Number of Sequences: 37544
Number of extensions: 240347
Number of successful extensions: 590
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4664047416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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