Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_E09_e165_09.seq
(1463 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 66 3e-10
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 66 3e-10
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 66 3e-10
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 66 3e-10
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 66 3e-10
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 66 3e-10
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 66 3e-10
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 66 3e-10
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 66 3e-10
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 66 3e-10
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 66 3e-10
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 66 3e-10
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 64 9e-10
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 62 4e-09
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 62 4e-09
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 62 4e-09
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 62 4e-09
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 62 4e-09
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 62 5e-09
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 62 5e-09
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 62 5e-09
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 60 2e-08
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 60 2e-08
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 60 2e-08
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 60 2e-08
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 60 2e-08
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 60 2e-08
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 60 2e-08
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 57 2e-07
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 57 2e-07
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 57 2e-07
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 57 2e-07
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 57 2e-07
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 49 5e-05
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 49 5e-05
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 49 5e-05
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 49 5e-05
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 42 0.004
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 42 0.004
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 42 0.004
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 40 0.030
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 40 0.030
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 40 0.030
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 40 0.030
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 40 0.030
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 40 0.030
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 40 0.030
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 40 0.030
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 37 0.16
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 37 0.16
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 37 0.16
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 37 0.16
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 37 0.21
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 37 0.21
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 37 0.21
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 37 0.21
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 37 0.21
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 37 0.21
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 37 0.21
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 37 0.21
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 37 0.21
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 37 0.21
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 36 0.28
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 36 0.28
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 36 0.28
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 36 0.28
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 36 0.28
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 35 0.65
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 35 0.65
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 35 0.65
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 35 0.86
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 34 1.5
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 34 1.5
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 34 1.5
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 34 1.5
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 34 1.5
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 34 1.5
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 32 4.6
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 59.3 bits (137), Expect = 3e-08
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI T D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIST-DIETIGEILKKIIPTLEE 110
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 130 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 189
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 190 SES-PIKGRAQPYDP 203
Score = 64.9 bits (151), Expect = 7e-10
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD-RGP 191
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L + +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEEYQHY 114
Query: 192 KGDINDQDLDVRVLIH 239
KG +D D ++R+LIH
Sbjct: 115 KG--SDFDCELRLLIH 128
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 213
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 214 SES-PIKGRAQPYDP 227
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 56 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 110
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 119 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 178
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 179 SES-PIKGRAQPYDP 192
Score = 63.3 bits (147), Expect = 2e-09
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 IXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD-RGPKG 197
I + NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L + + KG
Sbjct: 47 ILLQSKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEEYQHYKG 105
Query: 198 DINDQDLDVRVLIH 239
+D D ++R+LIH
Sbjct: 106 --SDFDCELRLLIH 117
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 85 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 144
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 145 SES-PIKGRAQPYDP 158
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +3
Query: 60 QYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 182
QY AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 2 QYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 41
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S AG +IG GAKIKELRE T +K+F P ST+R+V + GKPD ++ I+ +LDL
Sbjct: 132 SLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLI 191
Query: 424 XTXYXSRGLXXNYDP 468
+G YDP
Sbjct: 192 SES-PIKGRAQPYDP 205
Score = 64.9 bits (151), Expect = 7e-10
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +3
Query: 15 AGIXTRGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD-RGP 191
A I G NI LR+ Y AS++VPD GPER+LSI + D++T+ EI+K+I+P L + +
Sbjct: 58 AVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEEYQHY 116
Query: 192 KGDINDQDLDVRVLIH 239
KG +D D ++R+LIH
Sbjct: 117 KG--SDFDCELRLLIH 130
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 64.5 bits (150), Expect = 9e-10
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDLC 423
S+ G +IGK G+KIKE+RE TGA++++ + P STER V + G PD+II ++++ +
Sbjct: 107 SQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVM 166
Query: 424 XTXYXSRG 447
Y +G
Sbjct: 167 LEAYTIQG 174
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ G KI E+R+ +GA++KI +N S+ER + + G P +I
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 292
Score = 41.9 bits (94), Expect = 0.006
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
G +IGK G +K++RE++GAR+ I P ERIV + G D+I
Sbjct: 26 GSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGKAG KIKE+RE TGA++++ + P STER V + G PD+II +R++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 298
Score = 34.3 bits (75), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGI 402
G +IGK G +K +RE++ AR+ I P ERI + G ++ +
Sbjct: 30 GSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFHAV 76
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGKAG KIKE+RE TGA++++ + P STER V + G PD+II +R++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 298
Score = 34.3 bits (75), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGI 402
G +IGK G +K +RE++ AR+ I P ERI + G ++ +
Sbjct: 30 GSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFHAV 76
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGKAG KIKE+RE TGA++++ + P STER V + G PD+II +R++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 298
Score = 34.3 bits (75), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGI 402
G +IGK G +K +RE++ AR+ I P ERI + G ++ +
Sbjct: 30 GSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFHAV 76
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGKAG KIKE+RE TGA++++ + P STER V + G PD+II +R++
Sbjct: 77 SQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 132
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 220 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 264
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGKAG KIKE+RE TGA++++ + P STER V + G PD+II +R++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 298
Score = 34.3 bits (75), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGI 402
G +IGK G +K +RE++ AR+ I P ERI + G ++ +
Sbjct: 30 GSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFHAV 76
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 62.1 bits (144), Expect = 5e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G+KIKE+RE TGA++++ + P STER V + G PD+II ++++
Sbjct: 107 SQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ G KI E+R+ +GA++KI +N S+ER + + G P +I
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 340
Score = 41.9 bits (94), Expect = 0.006
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
G +IGK G +K++RE++GAR+ I P ERIV + G D+I
Sbjct: 26 GSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 62.1 bits (144), Expect = 5e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G+KIKE+RE TGA++++ + P STER V + G PD+II ++++
Sbjct: 139 SQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 194
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ G KI E+R+ +GA++KI +N S+ER + + G P +I
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 330
Score = 41.9 bits (94), Expect = 0.006
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
G +IGK G +K++RE++GAR+ I P ERIV + G D+I
Sbjct: 58 GSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 100
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 62.1 bits (144), Expect = 5e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G+KIKE+RE TGA++++ + P STER V + G PD+II ++++
Sbjct: 107 SQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI 162
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ G KI E+R+ +GA++KI +N S+ER + + G P +I
Sbjct: 274 GCIIGRQGTKINEIRQMSGAQIKI-ANATEGSSERQITITGTPANI 318
Score = 41.9 bits (94), Expect = 0.006
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
G +IGK G +K++RE++GAR+ I P ERIV + G D+I
Sbjct: 26 GSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAI 68
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IG+AG KIKE+RE TGA++++ + P STER V + G PD+II +R++
Sbjct: 111 SQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSGVPDAIILCVRQI 166
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 254 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 298
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G KIKE+RE TGA++++ + P STER + + G P SII ++++
Sbjct: 107 SQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GAKI E+R+ +GA++KI +N ST+R V + G SI
Sbjct: 300 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 344
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K++RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFKAFAMIID 77
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G KIKE+RE TGA++++ + P STER + + G P SII ++++
Sbjct: 107 SQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GAKI E+R+ +GA++KI +N ST+R V + G SI
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 314
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K++RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFKAFAMIID 77
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G KIKE+RE TGA++++ + P STER + + G P SII ++++
Sbjct: 107 SQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GAKI E+R+ +GA++KI +N ST+R V + G SI
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 345
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K++RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFKAFAMIID 77
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G KIKE+RE TGA++++ + P STER + + G P SII ++++
Sbjct: 107 SQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GAKI E+R+ +GA++KI +N ST+R V + G SI
Sbjct: 297 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 341
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K++RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFKAFAMIID 77
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G KIKE+RE TGA++++ + P STER + + G P SII ++++
Sbjct: 119 SQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 174
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GAKI E+R+ +GA++KI +N ST+R V + G SI
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 352
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K++RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 38 GSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFKAFAMIID 89
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 60.1 bits (139), Expect = 2e-08
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
S+ G +IGK G KIKE+RE TGA++++ + P STER + + G P SII ++++
Sbjct: 107 SQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GAKI E+R+ +GA++KI +N ST+R V + G SI
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKI-ANPVEGSTDRQVTITGSAASI 310
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K++RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFKAFAMIID 77
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
++ G +IGK G KIKE+RE TGA++++ + P STER + + G P S+ ++++
Sbjct: 107 TQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K +RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAFAMIID 77
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
++ G +IGK G KIKE+RE TGA++++ + P STER + + G P S+ ++++
Sbjct: 107 TQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K +RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAFAMIID 77
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GA I E+R+ +GA++KI +N S+ R V + G SI
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
++ G +IGK G KIKE+RE TGA++++ + P STER + + G P S+ ++++
Sbjct: 107 TQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K +RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAFAMIID 77
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GA I E+R+ +GA++KI +N S+ R V + G SI
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
++ G +IGK G KIKE+RE TGA++++ + P STER + + G P S+ ++++
Sbjct: 107 TQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K +RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAFAMIID 77
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GA I E+R+ +GA++KI +N S+ R V + G SI
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
++ G +IGK G KIKE+RE TGA++++ + P STER + + G P S+ ++++
Sbjct: 107 TQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREVLD 417
G +IGK G +K +RE++GAR+ I P ERI+ L G ++I ++D
Sbjct: 26 GSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAFAMIID 77
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GC+IG+ GA I E+R+ +GA++KI +N S+ R V + G SI
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKI-ANPVEGSSGRQVTITGSAASI 336
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 211 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 255
Score = 34.3 bits (75), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGI 402
G +IGK G +K +RE++ AR+ I P ERI + G ++ +
Sbjct: 30 GSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFHAV 76
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 275 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 319
Score = 36.3 bits (80), Expect = 0.28
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 298 EKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+ TGA++++ + P STER V + G PD+II +R++
Sbjct: 150 QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 187
Score = 32.3 bits (70), Expect = 4.6
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTG 309
S+ G +IGKAG KIKE+RE G
Sbjct: 77 SQCGSLIGKAGTKIKEIREVRG 98
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 275 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 319
Score = 36.3 bits (80), Expect = 0.28
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 298 EKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+ TGA++++ + P STER V + G PD+II +R++
Sbjct: 150 QTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 187
Score = 32.3 bits (70), Expect = 4.6
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTG 309
S+ G +IGKAG KIKE+RE G
Sbjct: 77 SQCGSLIGKAGTKIKEIREVRG 98
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSI 390
GCVIG+ G+KI E+R+ +GA +KI NQA + ER V + G P SI
Sbjct: 97 GCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSI 141
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK GA IK+L GA +KI + P +ER+V + G P++
Sbjct: 439 GAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 483
Score = 34.7 bits (76), Expect = 0.86
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTER-IVQLVG 375
S AG VIGK G + EL+ T A + + +Q P E IV+++G
Sbjct: 518 STAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIG 562
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK GA IK+L GA +KI + P +ER+V + G P++
Sbjct: 439 GAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 483
Score = 34.7 bits (76), Expect = 0.86
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTER-IVQLVG 375
S AG VIGK G + EL+ T A + + +Q P E IV+++G
Sbjct: 518 STAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIG 562
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK GA IK+L GA +KI + P +ER+V + G P++
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 441
Score = 34.7 bits (76), Expect = 0.86
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTER-IVQLVG 375
S AG VIGK G + EL+ T A + + +Q P E IV+++G
Sbjct: 476 STAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIG 520
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.030
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L GA +KI +AP + R+V + G P++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.030
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L GA +KI +AP + R+V + G P++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 39.5 bits (88), Expect = 0.030
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQST--ERIVQLVGKPDSIIAGIREVLD 417
S+AG VIGK G IK+L+E+ G ++ + PQ+T ++ +++ G P + VL+
Sbjct: 195 SKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLE 253
Query: 418 L 420
L
Sbjct: 254 L 254
Score = 33.5 bits (73), Expect = 2.0
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQS--TERIVQLVGKPDSI 390
+ G +IGK G IK + +++GAR+++ N P + ++ + G P I
Sbjct: 387 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 436
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.030
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L GA +KI +AP + R+V + G P++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 39.5 bits (88), Expect = 0.030
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQST--ERIVQLVGKPDSIIAGIREVLD 417
S+AG VIGK G IK+L+E+ G ++ + PQ+T ++ +++ G P + VL+
Sbjct: 194 SKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLE 252
Query: 418 L 420
L
Sbjct: 253 L 253
Score = 33.5 bits (73), Expect = 2.0
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQS--TERIVQLVGKPDSI 390
+ G +IGK G IK + +++GAR+++ N P + ++ + G P I
Sbjct: 386 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 435
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 39.5 bits (88), Expect = 0.030
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQST--ERIVQLVGKPDSIIAGIREVLD 417
S+AG VIGK G IK+L+E+ G ++ + PQ+T ++ +++ G P + VL+
Sbjct: 195 SKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLE 253
Query: 418 L 420
L
Sbjct: 254 L 254
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.030
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L GA +KI +AP + R+V + G P++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEA 462
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 39.5 bits (88), Expect = 0.030
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQST--ERIVQLVGKPDSIIAGIREVLD 417
S+AG VIGK G IK+L+E+ G ++ + PQ+T ++ +++ G P + VL+
Sbjct: 45 SKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLE 103
Query: 418 L 420
L
Sbjct: 104 L 104
Score = 33.5 bits (73), Expect = 2.0
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQS--TERIVQLVGKPDSI 390
+ G +IGK G IK + +++GAR+++ N P + ++ + G P I
Sbjct: 237 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQI 286
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 37.1 bits (82), Expect = 0.16
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQ-STERIVQLVGKPDSIIAGIREVLDL 420
+AG VIGK G IK+L+E+ G ++ + + + + ++ ++++G P + V+D+
Sbjct: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDI 302
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 37.1 bits (82), Expect = 0.16
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQ-STERIVQLVGKPDSIIAGIREVLDL 420
+AG VIGK G IK+L+E+ G ++ + + + + ++ ++++G P + V+D+
Sbjct: 188 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDI 246
Score = 31.5 bits (68), Expect = 8.0
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQS---TERIVQLVGKPDSI 390
+ G VIG+ G +K + ++TGA ++I S Q P + T ++ + G P I
Sbjct: 377 KCGLVIGRGGENVKAINQQTGAFVEI-SRQLPPTGTPTSKLFIIRGSPQQI 426
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 37.1 bits (82), Expect = 0.16
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQ-STERIVQLVGKPDSIIAGIREVLDL 420
+AG VIGK G IK+L+E+ G ++ + + + + ++ ++++G P + V+D+
Sbjct: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDI 302
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 37.1 bits (82), Expect = 0.16
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 247 RAGCVIGKAGAKIKELREKTGARLKIFSNQAPQ-STERIVQLVGKPDSIIAGIREVLDL 420
+AG VIGK G IK+L+E+ G ++ + + + + ++ ++++G P + V+D+
Sbjct: 62 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDI 120
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 790
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 36.7 bits (81), Expect = 0.21
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L A +KI + P S R+V + G P++
Sbjct: 279 GAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 323
Score = 34.3 bits (75), Expect = 1.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTER-IVQLVG 375
S AG VIGK G + EL+ T A + + +Q P ++ IV+++G
Sbjct: 358 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIG 402
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 63 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 111
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 372 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 420
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 790
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 239 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 287
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 425 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 473
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 36.7 bits (81), Expect = 0.21
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L A +KI + P S R+V + G P++
Sbjct: 418 GAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 462
Score = 34.3 bits (75), Expect = 1.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTER-IVQLVG 375
S AG VIGK G + EL+ T A + + +Q P ++ IV+++G
Sbjct: 497 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIG 541
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 36.7 bits (81), Expect = 0.21
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDS 387
G +IGK G IK+L A +KI + P S R+V + G P++
Sbjct: 418 GAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEA 462
Score = 34.3 bits (75), Expect = 1.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARLKIFSNQAPQSTER-IVQLVG 375
S AG VIGK G + EL+ T A + + +Q P ++ IV+++G
Sbjct: 497 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIG 541
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSIIAGIREV 411
+IGK G KI+++R+ TGAR+ IF A + ++ ++GK D++ +E+
Sbjct: 742 LIGKGGGKIRKVRDSTGARV-IFP-AAEDKDQDLITIIGKEDAVREAQKEL 790
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKPDSIIA 396
AG +IGK G I +L+++TGA +K+ ++ P +TER+ + G +++ A
Sbjct: 50 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 100
Score = 31.5 bits (68), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKP 381
G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 425 GAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 469
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKPDSIIA 396
AG +IGK G I +L+++TGA +K+ ++ P +TER+ + G +++ A
Sbjct: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Score = 31.5 bits (68), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKP 381
G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 434 GAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKPDSIIA 396
AG +IGK G I +L+++TGA +K+ ++ P +TER+ + G +++ A
Sbjct: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Score = 31.5 bits (68), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKP 381
G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 434 GAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKPDSIIA 396
AG +IGK G I +L+++TGA +K+ ++ P +TER+ + G +++ A
Sbjct: 44 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Score = 31.5 bits (68), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKP 381
G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 419 GAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 463
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKPDSIIA 396
AG +IGK G I +L+++TGA +K+ ++ P +TER+ + G +++ A
Sbjct: 16 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Score = 31.5 bits (68), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKP 381
G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 391 GAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSP 435
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 35.1 bits (77), Expect = 0.65
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSII---AGIREVL 414
+IG+ GA IK+LR++TGAR+ + + ER++ + G P + A I ++L
Sbjct: 67 IIGRQGANIKQLRKQTGARIDVDTEDV--GDERVLLISGFPVQVCKAKAAIHQIL 119
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 35.1 bits (77), Expect = 0.65
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSII---AGIREVL 414
+IG+ GA IK+LR++TGAR+ + + ER++ + G P + A I ++L
Sbjct: 67 IIGRQGANIKQLRKQTGARIDVDTEDV--GDERVLLISGFPVQVCKAKAAIHQIL 119
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 35.1 bits (77), Expect = 0.65
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKPDSII---AGIREVL 414
+IG+ GA IK+LR++TGAR+ + + ER++ + G P + A I ++L
Sbjct: 67 IIGRQGANIKQLRKQTGARIDVDTEDV--GDERVLLISGFPVQVCKAKAAIHQIL 119
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 34.7 bits (76), Expect = 0.86
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 259 VIGKAGAKIKELREKTGARLKIFSNQAPQSTERIVQLVGKP 381
+IG+ GA IK+LR++TGAR+ + + ER++ + G P
Sbjct: 67 IIGRQGANIKQLRKQTGARIDVDTEDV--GDERVLLISGFP 105
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARL-KIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDL 420
S+ G VIG+ G IK+L+E+TG ++ I P ++ +++ G + VL++
Sbjct: 200 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 259
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARL-KIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDL 420
S+ G VIG+ G IK+L+E+TG ++ I P ++ +++ G + VL++
Sbjct: 112 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 171
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARL-KIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDL 420
S+ G VIG+ G IK+L+E+TG ++ I P ++ +++ G + VL++
Sbjct: 112 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 171
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARL-KIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDL 420
S+ G VIG+ G IK+L+E+TG ++ I P ++ +++ G + VL++
Sbjct: 172 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 231
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARL-KIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDL 420
S+ G VIG+ G IK+L+E+TG ++ I P ++ +++ G + VL++
Sbjct: 112 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 171
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 33.9 bits (74), Expect = 1.5
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 244 SRAGCVIGKAGAKIKELREKTGARL-KIFSNQAPQSTERIVQLVGKPDSIIAGIREVLDL 420
S+ G VIG+ G IK+L+E+TG ++ I P ++ +++ G + VL++
Sbjct: 172 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 231
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 32.3 bits (70), Expect = 4.6
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Frame = +1
Query: 250 AGCVIGKAGAKIKELREKTGARLKI-----FSNQAPQSTERIVQLVGKPDSIIA 396
AG +IGK G I +L+++TGA +K+ + P +TER+ + G +++ A
Sbjct: 61 AGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEALNA 114
Score = 31.5 bits (68), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 253 GCVIGKAGAKIKELREKTGARLKIFSNQ--APQSTERIVQLVGKP 381
G ++GK G + E +E TGAR++I P + R V + G P
Sbjct: 437 GAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,428,812
Number of Sequences: 237096
Number of extensions: 1363651
Number of successful extensions: 2544
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 2343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2534
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21594798796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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