Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_E07_e149_09.seq
         (1530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   2.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   7.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 447 LFFLNYCLQHLCIYFATCHTEFVIIIYFTNNLYSYRLVSITHYY 578
           + F  + L  LCIY+  C    ++ IY+    +   ++  TH+Y
Sbjct: 273 IIFTMHLLFLLCIYYFYCALIILLCIYYFCRAF---IIFPTHFY 313



 Score = 23.0 bits (47), Expect = 6.0
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +3

Query: 447 LFFLNYCLQHLCIYFATCHTEFVIIIYFTNNLYSYRLVSITHY 575
           +FF  + L  LC+ + T H  F+  IY+  + +    + +  Y
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFY 229


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 447 MMIQLTVIYSFDDCILLNTLLTFNR 373
           + + LT++YS + C+     L FNR
Sbjct: 300 VFVILTLLYSLNSCVNPWIYLAFNR 324


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 721 YQYLLLIETHYNIHP**TRTGLLT 650
           Y + LLI+  Y ++P  TRT L T
Sbjct: 356 YDFELLIKGVYQVNPTKTRTNLPT 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,828
Number of Sequences: 336
Number of extensions: 6069
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45988825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)